view test-data/input.sam @ 0:05aa21d39189 draft

planemo upload for repository https://github.com/lldelisle/tools-lldelisle/tree/master/tools/revertR2orientationInBam commit fe9813fe41ba241b47f7b2b4e4c9672ef35c0b35-dirty
author lldelisle
date Wed, 19 Oct 2022 08:50:18 +0000
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@HD	VN:1.4	SO:coordinate
@SQ	SN:chr1	LN:195471971
1	163	chr1	3151308	255	43M	=	3151560	295	GTCCCAAAAAGCAGAGAGAAATATCTCTCTGGGCCTTATAGCA	AAAAAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE	NH:i:1 HI:i:1 AS:i:82 nM:i:1
1	83	chr1	3151560	255	43M	=	3151308	-295	CTGCTGGAAAAACTGTTCGTTTTAGGAAATAAGGGCGAGTGCG	EEEEEEAEEEEEEEEEAEEEEEEEEEEEEEEEEEEEEEAAAAA	NH:i:1 HI:i:1 AS:i:82 nM:i:1
2	137	chr1	3155261	255	9S20M	*	0	0	TGTGGGTTTTACACACGGGAGGAATCGGG	AAAAA/EEE/EE6EAEE6EAE6/EEEAEE	NH:i:1 HI:i:1 AS:i:19 nM:i:0
3	99	chr1	3195817	255	43M	=	3195911	137	ATCTTACTCTGTTTCACAGATAGGTGCTGAGGTTAAATTTTGC	AAAAAEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEE	NH:i:1 HI:i:1 AS:i:84 nM:i:0
3	147	chr1	3195911	255	43M	=	3195817	-137	GGTGTAGGTTCTTAGACGCAAGAAATCTCAGGTAGAGTTTGGC	EEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEEAAAAA	NH:i:1 HI:i:1 AS:i:84 nM:i:0