Mercurial > repos > lparsons > cutadapt

comparison macros.xml @ 25:4e5056fefd88 draft

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"planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cutadapt commit cf6548ab28f5f6b2bdce8b1159cfc7ee472f0af6"
author iuc
date Fri, 02 Jul 2021 21:20:57 +0000
parents 288f97432497
children 44e2cc14f75b
comparison
equal deleted inserted replaced
24:288f97432497 25:4e5056fefd88
1 <macros> 1 <macros>
2 <token name="@TOOL_VERSION@">3.4</token> 2 <token name="@TOOL_VERSION@">3.4</token>
3 <token name="@GALAXY_TOOL_VERSION@">galaxy0</token> 3 <token name="@GALAXY_TOOL_VERSION@">galaxy1</token>
4 <xml name="edam_ontology"> 4 <xml name="edam_ontology">
5 <edam_topics> 5 <edam_topics>
6 <edam_topic>topic_0632</edam_topic> 6 <edam_topic>topic_0632</edam_topic>
7 </edam_topics> 7 </edam_topics>
8 <edam_operations> 8 <edam_operations>
263 <param name="anywhere_adapter_file" argument="-b" format="fasta" type="data" help="Should be of datatype &quot;FASTA&quot;" label="Choose file containing 3' or 5' adapters" /> 263 <param name="anywhere_adapter_file" argument="-b" format="fasta" type="data" help="Should be of datatype &quot;FASTA&quot;" label="Choose file containing 3' or 5' adapters" />
264 </when> 264 </when>
265 </conditional> 265 </conditional>
266 </repeat> 266 </repeat>
267 267
268 <param name="cut" argument="-u" type="integer" value="0" optional="True" label="Cut bases from reads before adapter trimming" help="Remove bases from each read (first read only if paired). If positive, remove bases from the beginning. If negative, remove bases from the end. This is applied *before* adapter trimming." /> 268 <param name="cut" argument="--cut" type="integer" value="0" optional="True" label="Cut bases from reads before adapter trimming" help="Remove bases from each read (first read only if paired). If positive, remove bases from the beginning. If negative, remove bases from the end. This is applied *before* adapter trimming." />
269 269
270 </section> 270 </section>
271 271
272 </xml> 272 </xml>
273 273