# HG changeset patch
# User iuc
# Date 1721296470 0
# Node ID 5eb7e84243f2ee883570918386fcfd7ac49b773e
# Parent  aa784cb3810d1a1c8ea340e2d284d2e7b89cf4d8
planemo upload for repository https://github.com/galaxyproject/tools-iuc/tree/master/tools/cutadapt commit fff23da3bceafb57de06af03d4c8ab4d66d4b098

diff -r aa784cb3810d -r 5eb7e84243f2 macros.xml
--- a/macros.xml	Mon Jul 08 16:21:21 2024 +0000
+++ b/macros.xml	Thu Jul 18 09:54:30 2024 +0000
@@ -1,6 +1,6 @@
 <macros>
     <token name="@TOOL_VERSION@">4.9</token>
-    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@VERSION_SUFFIX@">1</token>
     <token name="@FASTQ_TYPES@">fastq.bz2,fastq.gz,fastq,fasta.bz2,fasta.gz,fasta</token>
     <xml name="edam_ontology">
         <edam_topics>
@@ -38,34 +38,8 @@
         #end if
     </token>
     <xml name="adapter_sanitizer">
-        <sanitizer>
-            <valid initial="string.digits">
-                <add value="A"/><!--standard nucleotides-->
-                <add value="T"/>
-                <add value="C"/>
-                <add value="G"/>
-                <add value="U"/><!--ambiguous nucleotides-->
-                <add value="R"/>
-                <add value="Y"/>
-                <add value="S"/>
-                <add value="W"/>
-                <add value="K"/>
-                <add value="M"/>
-                <add value="B"/>
-                <add value="D"/>
-                <add value="H"/>
-                <add value="V"/>
-                <add value="N"/>
-                <add value="X"/><!-- don't match any nucleotide-->
-                <add value="{"/><!--specify repeats .. needs digits which are added as default-->
-                <add value="}"/>
-                <add value="^"/><!--anchoring-->
-                <add value="$"/>
-                <add value="."/>
-                <add value="("/><!--specify what to keep-->
-                <add value=")"/>
-            </valid>
-        </sanitizer>
+        <sanitizer sanitize="false" />
+        <validator type="regex" message="Invalid adapter sequence. Allowed are strings consisting of digits IUPAC nucleotides (including wildcards) and any of the following '{}^$.()'. See https://cutadapt.readthedocs.io/en/stable/guide.html#specifying-adapter-sequences"><![CDATA[[0-9ATCGURYSWKMBDHVNX{}^$.()]+$]]></validator>
     </xml>
     <xml name="adapter_conditional" tokens="adapter_type,argument">
         <conditional name="adapter_source">