Mercurial > repos > lparsons > ea_utils

annotate test-data/test_read3.fastq @ 2:71eaf2e85ae7 draft

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author lparsons
date Tue, 20 Nov 2012 16:00:51 -0500
parents e6f1c31279db
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e6f1c31279db Initial version with fastq-join
Lance Parsons <lparsons@princeton.edu>
parents:
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1 @JLK5VL1:222:D1888ACXX:1:1101:1656:2143 3:N:0:
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2 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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3 +
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4 BB8=4ADDHHHHACG<FHIGGIIIIICAEEC;CDF0@DEG3?BBACCGGICFD@@;@7;AED<<=CC@>(;(;@C@C:<:>>@>>;B>B(44?>C@B9<<8
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5 @JLK5VL1:222:D1888ACXX:1:1101:1613:2167 3:N:0:
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6 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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7 +
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8 @?=DDDFFDFHHHIGGHHIGGFEGIJJFAFEGGGH@AFFHGIIIGEFHBF>@FCGAE@DD=D'9@DCC@;C@C@CDDCD>CCD@>>:@@C@CDDACA<28?
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9 @JLK5VL1:222:D1888ACXX:1:1101:1927:2121 3:N:0:
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10 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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11 +
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12 CCCFFFFFHHHHHJIIJJJJJJIJJJJIJJJJJJJIJJJJJJJJJJJJJJIHIJJIJEEHHF>BBDEFEDDDDDDDCDDDDCDDDEEEEDDDDDDDBDBDD
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13 @JLK5VL1:222:D1888ACXX:1:1101:2000:2166 3:N:0:
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14 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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16 B@@DDFFFGHHHDIFHIJIIIJJJJIJJJJJIJJIIJIJIGIIJGIJJJJDFGGGII:DHFF<BDECDEDD@CCCDDCDDDCEDDDDC@C@CCDCD?@8<<
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17 @JLK5VL1:222:D1888ACXX:1:1101:1763:2172 3:N:0:
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18 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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20 @;?DFDFFFDHHDIGACFHGGGGJJEH3@GDGCGHIEIIG?FDHCEGHEI9@C@C@@@9@=<',5;5;;;AC>3>C>CCCC(5(;>CDECCAC>@AB08AB
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21 @JLK5VL1:222:D1888ACXX:1:1101:1832:2198 3:N:0:
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22 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATGCTTGTGAACAATGTGTATTCACTAACAACGTCA
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23 +
e6f1c31279db Initial version with fastq-join
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24 C@@FFFFFHHHHHJJJJJIJIJJJJIIJJIJIIFIGIJGHIDGIIIGIJJIHGHIIJGIIHF<<@DDDDEEDDCCCDDDCCCDDDEDDEDDCCDDCBB?AB
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25 @JLK5VL1:222:D1888ACXX:1:1101:2169:2161 3:N:0:
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26 TTTGCCCTATTTATAGGACCCTAGAAAGAAAAAACCTCAAATAAAATAAAAGTGATTGGCGGGATATACTTGTGAACAATGTGTATTTACTTACCACCACC
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27 +
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28 #####################################################################################################
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29 @JLK5VL1:222:D1888ACXX:1:1101:2236:2214 3:N:0:
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30 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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31 +
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32 @@@DDFFFHHHHFEEGIEHIJJGGFGIGIHCHJJJJJJIJIJGIGGIJIJGCDGEGG>EGHF=ABC@BDDCDDA@CCCCDCDE@CCD>CC@CDDDDBD?<<
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33 @JLK5VL1:222:D1888ACXX:1:1101:2090:2240 3:N:0:
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34 TGGATCCTATTAATAGGACCCTAGAAAGATAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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35 +
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36 CC@FFFFFGFHDDHH>@FHHCHIIGIIEGGHIJIIBEEHIGGGGJIJJJJGBFGIGGCAHEA,9?B>B@@C>@@ACACCCC@C@@CDCDC@>CCCDD@(8?
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37 @JLK5VL1:222:D1888ACXX:1:1101:2952:2161 3:N:0:
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38 TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
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39 +
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40 CCCFFFFFHHHGHJJJJJIJJJJJIJJJHIJJIJJIIGIIIJEIIJIIJIG@FHIJJJIJHF<A?CBCC>CCDCCDDDDDDCDCCDDEACA@CDDDDDABB