Mercurial > repos > lparsons > ea_utils
comparison README.txt @ 1:cf4b5125a835 draft
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| author | lparsons |
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| date | Tue, 20 Nov 2012 15:54:14 -0500 |
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| 0:e6f1c31279db | 1:cf4b5125a835 |
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| 1 == ea-utils Galaxy Wrapper == | |
| 2 | |
| 3 This is a Galaxy wrapper for some ea-utils tools, fastq-join and sam-stats. | |
| 4 | |
| 5 ** Installation ** | |
| 6 | |
| 7 Installation from a tool shed provides the necessary tool dependencies. | |
| 8 | |
| 9 Otherwise, make sure fastq-join and sam-stats are in the path. | |
| 10 Move the test data files to your galaxy root test-data. | |
| 11 Move the xml files to a subdirectory of your tools directory and add lines in tool_conf.xml to point to them. | |
| 12 Restart the Galaxy server. | |
| 13 | |
| 14 ** Attribution ** | |
| 15 | |
| 16 The ea-utils package and associated documentation can be found at: http://code.google.com/p/ea-utils/ | |
| 17 | |
| 18 The galaxy wrapper code was written by Lance Parsons (lparsons@princeton.edu), Lewis-Sigler Institute for Integrative Genomics, Princeton University. | |
| 19 The code is housed on BitBucket at: https://bitbucket.org/lance_parsons/ea_utils_galaxy_wrapper |