Mercurial > repos > lparsons > fastq_join

diff test-data/test_read3.fastq @ 0:2ac846969812 draft

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Uploaded initial version with package dependency
author lparsons
date Fri, 27 Jun 2014 15:39:38 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test_read3.fastq	Fri Jun 27 15:39:38 2014 -0400
@@ -0,0 +1,40 @@
+@JLK5VL1:222:D1888ACXX:1:1101:1656:2143 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+BB8=4ADDHHHHACG<FHIGGIIIIICAEEC;CDF0@DEG3?BBACCGGICFD@@;@7;AED<<=CC@>(;(;@C@C:<:>>@>>;B>B(44?>C@B9<<8
+@JLK5VL1:222:D1888ACXX:1:1101:1613:2167 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+@?=DDDFFDFHHHIGGHHIGGFEGIJJFAFEGGGH@AFFHGIIIGEFHBF>@FCGAE@DD=D'9@DCC@;C@C@CDDCD>CCD@>>:@@C@CDDACA<28?
+@JLK5VL1:222:D1888ACXX:1:1101:1927:2121 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+CCCFFFFFHHHHHJIIJJJJJJIJJJJIJJJJJJJIJJJJJJJJJJJJJJIHIJJIJEEHHF>BBDEFEDDDDDDDCDDDDCDDDEEEEDDDDDDDBDBDD
+@JLK5VL1:222:D1888ACXX:1:1101:2000:2166 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+B@@DDFFFGHHHDIFHIJIIIJJJJIJJJJJIJJIIJIJIGIIJGIJJJJDFGGGII:DHFF<BDECDEDD@CCCDDCDDDCEDDDDC@C@CCDCD?@8<<
+@JLK5VL1:222:D1888ACXX:1:1101:1763:2172 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+@;?DFDFFFDHHDIGACFHGGGGJJEH3@GDGCGHIEIIG?FDHCEGHEI9@C@C@@@9@=<',5;5;;;AC>3>C>CCCC(5(;>CDECCAC>@AB08AB
+@JLK5VL1:222:D1888ACXX:1:1101:1832:2198 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATGCTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+C@@FFFFFHHHHHJJJJJIJIJJJJIIJJIJIIFIGIJGHIDGIIIGIJJIHGHIIJGIIHF<<@DDDDEEDDCCCDDDCCCDDDEDDEDDCCDDCBB?AB
+@JLK5VL1:222:D1888ACXX:1:1101:2169:2161 3:N:0:
+TTTGCCCTATTTATAGGACCCTAGAAAGAAAAAACCTCAAATAAAATAAAAGTGATTGGCGGGATATACTTGTGAACAATGTGTATTTACTTACCACCACC
++
+#####################################################################################################
+@JLK5VL1:222:D1888ACXX:1:1101:2236:2214 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+@@@DDFFFHHHHFEEGIEHIJJGGFGIGIHCHJJJJJJIJIJGIGGIJIJGCDGEGG>EGHF=ABC@BDDCDDA@CCCCDCDE@CCD>CC@CDDDDBD?<<
+@JLK5VL1:222:D1888ACXX:1:1101:2090:2240 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGATAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+CC@FFFFFGFHDDHH>@FHHCHIIGIIEGGHIJIIBEEHIGGGGJIJJJJGBFGIGGCAHEA,9?B>B@@C>@@ACACCCC@C@@CDCDC@>CCCDD@(8?
+@JLK5VL1:222:D1888ACXX:1:1101:2952:2161 3:N:0:
+TGGATCCTATTAATAGGACCCTAGAAAGAAAAAACGCCAATCACAATAAAGTTGATTGGCGGTATATACTTGTGAACAATGTGTATTCACTAACAACGTCA
++
+CCCFFFFFHHHGHJJJJJIJJJJJIJJJHIJJIJJIIGIIIJEIIJIIJIG@FHIJJJIJHF<A?CBCC>CCDCCDDDDDDCDCCDDEACA@CDDDDDABB