htseq-count wrapper for Galaxy
==============================

Galaxy wrapper for `htseq-count <https://htseq.readthedocs.io/en/latest/history.html#version-2-0-5>`_
script from the `HTSEQ <https://readthedocs.org/projects/htseq/>`_ python package.

Installation
------------

Installation directly from the `Galaxy Toolshed <http://toolshed.g2.bx.psu.edu/view/lparsons/htseq_count>`_
is recommended.

Galaxy Wrapper License
----------------------

Copyright (c) 2012-2018, Lance R. Parsons <lparsons@princeton.edu>
All rights reserved.

Licensed under the BSD 2-Clause License: <http://opensource.org/licenses/BSD-2-Clause>

    Redistribution and use in source and binary forms, with or without
    modification, are permitted provided that the following conditions are met:

        * Redistributions of source code must retain the above copyright notice,
          this list of conditions and the following disclaimer.

        * Redistributions in binary form must reproduce the above copyright notice,
          this list of conditions and the following disclaimer in the documentation
          and/or other materials provided with the distribution.

    THIS SOFTWARE IS PROVIDED BY THE COPYRIGHT HOLDERS AND CONTRIBUTORS "AS IS" AND
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    WARRANTIES OF MERCHANTABILITY AND FITNESS FOR A PARTICULAR PURPOSE ARE
    DISCLAIMED. IN NO EVENT SHALL THE COPYRIGHT HOLDER OR CONTRIBUTORS BE LIABLE
    FOR ANY DIRECT, INDIRECT, INCIDENTAL, SPECIAL, EXEMPLARY, OR CONSEQUENTIAL
    DAMAGES (INCLUDING, BUT NOT LIMITED TO, PROCUREMENT OF SUBSTITUTE GOODS OR
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