Mercurial > repos > lparsons > package_ea_utils_1_1_2_806

diff tool_dependencies.xml @ 0:cea0aa441b97 draft default tip

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planemo upload for repository https://github.com/lparsons/galaxy-tools/tree/master/packages/package_ea_utils_1_1_2_806 commit 1a3c419bc0ded7c40cb2bc3e7c87bfb01ddfeba2
author lparsons
date Thu, 16 Jul 2015 17:35:41 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/tool_dependencies.xml	Thu Jul 16 17:35:41 2015 -0400
@@ -0,0 +1,30 @@
+<?xml version="1.0"?>
+<tool_dependency>
+    <!--
+    <package name="gsl" version="1.16">
+        <repository name="package_gsl_1_16" owner="iuc" prior_installation_required="True"/>
+    </package>
+    -->
+    <package name="ea-utils" version="1.1.2-806">
+        <install version="1.0">
+            <actions>
+                <action type="download_by_url" target_filename="ea-utils.1.1.2-806.tar.gz">https://drive.google.com/uc?export=download&amp;id=0B7KhouP0YeRAc2xackxzRnFrUEU</action>
+                <!--
+                <action type="set_environment_for_install">
+                    <repository name="package_gsl_1_16" owner="iuc">
+                        <package name="gsl" version="1.1.16" />
+                    </repository>
+                </action>
+                -->
+                <!-- Unable to get varcall to compile properly (even with gsl dependency), we don't need it, so skip -->
+                <action type="shell_command">sed -i.bak 's/\(^BIN=.*\)varcall$\|\$(BINDIR)\/varcall/\1/' Makefile</action>
+                <action type="shell_command">PREFIX=$INSTALL_DIR make install</action>
+                <action type="set_environment">
+                    <environment_variable name="PATH" action="prepend_to">$INSTALL_DIR/bin</environment_variable>
+                </action>
+            </actions>
+        </install>
+        <readme>
+        </readme>
+    </package>
+</tool_dependency>