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comparison PsiCLASS-1.0.2/samtools-0.1.19/bcftools/kmin.h @ 0:903fc43d6227 draft default tip

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author lsong10
date Fri, 26 Mar 2021 16:52:45 +0000
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1 /*
2 Copyright (c) 2008, 2010 by Attractive Chaos <attractor@live.co.uk>
3
4 Permission is hereby granted, free of charge, to any person obtaining
5 a copy of this software and associated documentation files (the
6 "Software"), to deal in the Software without restriction, including
7 without limitation the rights to use, copy, modify, merge, publish,
8 distribute, sublicense, and/or sell copies of the Software, and to
9 permit persons to whom the Software is furnished to do so, subject to
10 the following conditions:
11
12 The above copyright notice and this permission notice shall be
13 included in all copies or substantial portions of the Software.
14
15 THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND,
16 EXPRESS OR IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF
17 MERCHANTABILITY, FITNESS FOR A PARTICULAR PURPOSE AND
18 NONINFRINGEMENT. IN NO EVENT SHALL THE AUTHORS OR COPYRIGHT HOLDERS
19 BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER LIABILITY, WHETHER IN AN
20 ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM, OUT OF OR IN
21 CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
22 SOFTWARE.
23 */
24
25 #ifndef KMIN_H
26 #define KMIN_H
27
28 #define KMIN_RADIUS 0.5
29 #define KMIN_EPS 1e-7
30 #define KMIN_MAXCALL 50000
31
32 typedef double (*kmin_f)(int, double*, void*);
33 typedef double (*kmin1_f)(double, void*);
34
35 #ifdef __cplusplus
36 extern "C" {
37 #endif
38
39 double kmin_hj(kmin_f func, int n, double *x, void *data, double r, double eps, int max_calls);
40 double kmin_brent(kmin1_f func, double a, double b, void *data, double tol, double *xmin);
41
42 #ifdef __cplusplus
43 }
44 #endif
45
46 #endif