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comparison PsiCLASS-1.0.2/samtools-0.1.19/misc/md5.c @ 0:903fc43d6227 draft default tip
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author | lsong10 |
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date | Fri, 26 Mar 2021 16:52:45 +0000 |
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1 /* | |
2 * This code implements the MD5 message-digest algorithm. | |
3 * The algorithm is due to Ron Rivest. This code was | |
4 * written by Colin Plumb in 1993, no copyright is claimed. | |
5 * This code is in the public domain; do with it what you wish. | |
6 * | |
7 * Equivalent code is available from RSA Data Security, Inc. | |
8 * This code has been tested against that, and is equivalent, | |
9 * except that you don't need to include two pages of legalese | |
10 * with every copy. | |
11 * | |
12 * To compute the message digest of a chunk of bytes, declare an | |
13 * MD5Context structure, pass it to MD5Init, call MD5Update as | |
14 * needed on buffers full of bytes, and then call MD5Final, which | |
15 * will fill a supplied 16-byte array with the digest. | |
16 */ | |
17 | |
18 /* Brutally hacked by John Walker back from ANSI C to K&R (no | |
19 prototypes) to maintain the tradition that Netfone will compile | |
20 with Sun's original "cc". */ | |
21 | |
22 #include <string.h> | |
23 #include "md5.h" | |
24 | |
25 #ifndef HIGHFIRST | |
26 #define byteReverse(buf, len) /* Nothing */ | |
27 #else | |
28 /* | |
29 * Note: this code is harmless on little-endian machines. | |
30 */ | |
31 void byteReverse(buf, longs) | |
32 unsigned char *buf; unsigned longs; | |
33 { | |
34 uint32_t t; | |
35 do { | |
36 t = (uint32_t) ((unsigned) buf[3] << 8 | buf[2]) << 16 | | |
37 ((unsigned) buf[1] << 8 | buf[0]); | |
38 *(uint32_t *) buf = t; | |
39 buf += 4; | |
40 } while (--longs); | |
41 } | |
42 #endif | |
43 | |
44 void MD5Transform(uint32_t buf[4], uint32_t in[16]); | |
45 | |
46 | |
47 /* | |
48 * Start MD5 accumulation. Set bit count to 0 and buffer to mysterious | |
49 * initialization constants. | |
50 */ | |
51 void MD5Init(ctx) | |
52 struct MD5Context *ctx; | |
53 { | |
54 ctx->buf[0] = 0x67452301; | |
55 ctx->buf[1] = 0xefcdab89; | |
56 ctx->buf[2] = 0x98badcfe; | |
57 ctx->buf[3] = 0x10325476; | |
58 | |
59 ctx->bits[0] = 0; | |
60 ctx->bits[1] = 0; | |
61 } | |
62 | |
63 /* | |
64 * Update context to reflect the concatenation of another buffer full | |
65 * of bytes. | |
66 */ | |
67 void MD5Update(ctx, buf, len) | |
68 struct MD5Context *ctx; unsigned char *buf; unsigned len; | |
69 { | |
70 uint32_t t; | |
71 | |
72 /* Update bitcount */ | |
73 | |
74 t = ctx->bits[0]; | |
75 if ((ctx->bits[0] = t + ((uint32_t) len << 3)) < t) | |
76 ctx->bits[1]++; /* Carry from low to high */ | |
77 ctx->bits[1] += len >> 29; | |
78 | |
79 t = (t >> 3) & 0x3f; /* Bytes already in shsInfo->data */ | |
80 | |
81 /* Handle any leading odd-sized chunks */ | |
82 | |
83 if (t) { | |
84 unsigned char *p = (unsigned char *) ctx->in + t; | |
85 | |
86 t = 64 - t; | |
87 if (len < t) { | |
88 memcpy(p, buf, len); | |
89 return; | |
90 } | |
91 memcpy(p, buf, t); | |
92 byteReverse(ctx->in, 16); | |
93 MD5Transform(ctx->buf, (uint32_t *) ctx->in); | |
94 buf += t; | |
95 len -= t; | |
96 } | |
97 /* Process data in 64-byte chunks */ | |
98 | |
99 while (len >= 64) { | |
100 memcpy(ctx->in, buf, 64); | |
101 byteReverse(ctx->in, 16); | |
102 MD5Transform(ctx->buf, (uint32_t *) ctx->in); | |
103 buf += 64; | |
104 len -= 64; | |
105 } | |
106 | |
107 /* Handle any remaining bytes of data. */ | |
108 | |
109 memcpy(ctx->in, buf, len); | |
110 } | |
111 | |
112 /* | |
113 * Final wrapup - pad to 64-byte boundary with the bit pattern | |
114 * 1 0* (64-bit count of bits processed, MSB-first) | |
115 */ | |
116 void MD5Final(digest, ctx) | |
117 unsigned char digest[16]; struct MD5Context *ctx; | |
118 { | |
119 unsigned count; | |
120 unsigned char *p; | |
121 | |
122 /* Compute number of bytes mod 64 */ | |
123 count = (ctx->bits[0] >> 3) & 0x3F; | |
124 | |
125 /* Set the first char of padding to 0x80. This is safe since there is | |
126 always at least one byte free */ | |
127 p = ctx->in + count; | |
128 *p++ = 0x80; | |
129 | |
130 /* Bytes of padding needed to make 64 bytes */ | |
131 count = 64 - 1 - count; | |
132 | |
133 /* Pad out to 56 mod 64 */ | |
134 if (count < 8) { | |
135 /* Two lots of padding: Pad the first block to 64 bytes */ | |
136 memset(p, 0, count); | |
137 byteReverse(ctx->in, 16); | |
138 MD5Transform(ctx->buf, (uint32_t *) ctx->in); | |
139 | |
140 /* Now fill the next block with 56 bytes */ | |
141 memset(ctx->in, 0, 56); | |
142 } else { | |
143 /* Pad block to 56 bytes */ | |
144 memset(p, 0, count - 8); | |
145 } | |
146 byteReverse(ctx->in, 14); | |
147 | |
148 /* Append length in bits and transform */ | |
149 ((uint32_t *) ctx->in)[14] = ctx->bits[0]; | |
150 ((uint32_t *) ctx->in)[15] = ctx->bits[1]; | |
151 | |
152 MD5Transform(ctx->buf, (uint32_t *) ctx->in); | |
153 byteReverse((unsigned char *) ctx->buf, 4); | |
154 memcpy(digest, ctx->buf, 16); | |
155 memset(ctx, 0, sizeof(ctx)); /* In case it's sensitive */ | |
156 } | |
157 | |
158 | |
159 /* The four core functions - F1 is optimized somewhat */ | |
160 | |
161 /* #define F1(x, y, z) (x & y | ~x & z) */ | |
162 #define F1(x, y, z) (z ^ (x & (y ^ z))) | |
163 #define F2(x, y, z) F1(z, x, y) | |
164 #define F3(x, y, z) (x ^ y ^ z) | |
165 #define F4(x, y, z) (y ^ (x | ~z)) | |
166 | |
167 /* This is the central step in the MD5 algorithm. */ | |
168 #define MD5STEP(f, w, x, y, z, data, s) \ | |
169 ( w += f(x, y, z) + data, w = w<<s | w>>(32-s), w += x ) | |
170 | |
171 /* | |
172 * The core of the MD5 algorithm, this alters an existing MD5 hash to | |
173 * reflect the addition of 16 longwords of new data. MD5Update blocks | |
174 * the data and converts bytes into longwords for this routine. | |
175 */ | |
176 void MD5Transform(buf, in) | |
177 uint32_t buf[4]; uint32_t in[16]; | |
178 { | |
179 register uint32_t a, b, c, d; | |
180 | |
181 a = buf[0]; | |
182 b = buf[1]; | |
183 c = buf[2]; | |
184 d = buf[3]; | |
185 | |
186 MD5STEP(F1, a, b, c, d, in[0] + 0xd76aa478, 7); | |
187 MD5STEP(F1, d, a, b, c, in[1] + 0xe8c7b756, 12); | |
188 MD5STEP(F1, c, d, a, b, in[2] + 0x242070db, 17); | |
189 MD5STEP(F1, b, c, d, a, in[3] + 0xc1bdceee, 22); | |
190 MD5STEP(F1, a, b, c, d, in[4] + 0xf57c0faf, 7); | |
191 MD5STEP(F1, d, a, b, c, in[5] + 0x4787c62a, 12); | |
192 MD5STEP(F1, c, d, a, b, in[6] + 0xa8304613, 17); | |
193 MD5STEP(F1, b, c, d, a, in[7] + 0xfd469501, 22); | |
194 MD5STEP(F1, a, b, c, d, in[8] + 0x698098d8, 7); | |
195 MD5STEP(F1, d, a, b, c, in[9] + 0x8b44f7af, 12); | |
196 MD5STEP(F1, c, d, a, b, in[10] + 0xffff5bb1, 17); | |
197 MD5STEP(F1, b, c, d, a, in[11] + 0x895cd7be, 22); | |
198 MD5STEP(F1, a, b, c, d, in[12] + 0x6b901122, 7); | |
199 MD5STEP(F1, d, a, b, c, in[13] + 0xfd987193, 12); | |
200 MD5STEP(F1, c, d, a, b, in[14] + 0xa679438e, 17); | |
201 MD5STEP(F1, b, c, d, a, in[15] + 0x49b40821, 22); | |
202 | |
203 MD5STEP(F2, a, b, c, d, in[1] + 0xf61e2562, 5); | |
204 MD5STEP(F2, d, a, b, c, in[6] + 0xc040b340, 9); | |
205 MD5STEP(F2, c, d, a, b, in[11] + 0x265e5a51, 14); | |
206 MD5STEP(F2, b, c, d, a, in[0] + 0xe9b6c7aa, 20); | |
207 MD5STEP(F2, a, b, c, d, in[5] + 0xd62f105d, 5); | |
208 MD5STEP(F2, d, a, b, c, in[10] + 0x02441453, 9); | |
209 MD5STEP(F2, c, d, a, b, in[15] + 0xd8a1e681, 14); | |
210 MD5STEP(F2, b, c, d, a, in[4] + 0xe7d3fbc8, 20); | |
211 MD5STEP(F2, a, b, c, d, in[9] + 0x21e1cde6, 5); | |
212 MD5STEP(F2, d, a, b, c, in[14] + 0xc33707d6, 9); | |
213 MD5STEP(F2, c, d, a, b, in[3] + 0xf4d50d87, 14); | |
214 MD5STEP(F2, b, c, d, a, in[8] + 0x455a14ed, 20); | |
215 MD5STEP(F2, a, b, c, d, in[13] + 0xa9e3e905, 5); | |
216 MD5STEP(F2, d, a, b, c, in[2] + 0xfcefa3f8, 9); | |
217 MD5STEP(F2, c, d, a, b, in[7] + 0x676f02d9, 14); | |
218 MD5STEP(F2, b, c, d, a, in[12] + 0x8d2a4c8a, 20); | |
219 | |
220 MD5STEP(F3, a, b, c, d, in[5] + 0xfffa3942, 4); | |
221 MD5STEP(F3, d, a, b, c, in[8] + 0x8771f681, 11); | |
222 MD5STEP(F3, c, d, a, b, in[11] + 0x6d9d6122, 16); | |
223 MD5STEP(F3, b, c, d, a, in[14] + 0xfde5380c, 23); | |
224 MD5STEP(F3, a, b, c, d, in[1] + 0xa4beea44, 4); | |
225 MD5STEP(F3, d, a, b, c, in[4] + 0x4bdecfa9, 11); | |
226 MD5STEP(F3, c, d, a, b, in[7] + 0xf6bb4b60, 16); | |
227 MD5STEP(F3, b, c, d, a, in[10] + 0xbebfbc70, 23); | |
228 MD5STEP(F3, a, b, c, d, in[13] + 0x289b7ec6, 4); | |
229 MD5STEP(F3, d, a, b, c, in[0] + 0xeaa127fa, 11); | |
230 MD5STEP(F3, c, d, a, b, in[3] + 0xd4ef3085, 16); | |
231 MD5STEP(F3, b, c, d, a, in[6] + 0x04881d05, 23); | |
232 MD5STEP(F3, a, b, c, d, in[9] + 0xd9d4d039, 4); | |
233 MD5STEP(F3, d, a, b, c, in[12] + 0xe6db99e5, 11); | |
234 MD5STEP(F3, c, d, a, b, in[15] + 0x1fa27cf8, 16); | |
235 MD5STEP(F3, b, c, d, a, in[2] + 0xc4ac5665, 23); | |
236 | |
237 MD5STEP(F4, a, b, c, d, in[0] + 0xf4292244, 6); | |
238 MD5STEP(F4, d, a, b, c, in[7] + 0x432aff97, 10); | |
239 MD5STEP(F4, c, d, a, b, in[14] + 0xab9423a7, 15); | |
240 MD5STEP(F4, b, c, d, a, in[5] + 0xfc93a039, 21); | |
241 MD5STEP(F4, a, b, c, d, in[12] + 0x655b59c3, 6); | |
242 MD5STEP(F4, d, a, b, c, in[3] + 0x8f0ccc92, 10); | |
243 MD5STEP(F4, c, d, a, b, in[10] + 0xffeff47d, 15); | |
244 MD5STEP(F4, b, c, d, a, in[1] + 0x85845dd1, 21); | |
245 MD5STEP(F4, a, b, c, d, in[8] + 0x6fa87e4f, 6); | |
246 MD5STEP(F4, d, a, b, c, in[15] + 0xfe2ce6e0, 10); | |
247 MD5STEP(F4, c, d, a, b, in[6] + 0xa3014314, 15); | |
248 MD5STEP(F4, b, c, d, a, in[13] + 0x4e0811a1, 21); | |
249 MD5STEP(F4, a, b, c, d, in[4] + 0xf7537e82, 6); | |
250 MD5STEP(F4, d, a, b, c, in[11] + 0xbd3af235, 10); | |
251 MD5STEP(F4, c, d, a, b, in[2] + 0x2ad7d2bb, 15); | |
252 MD5STEP(F4, b, c, d, a, in[9] + 0xeb86d391, 21); | |
253 | |
254 buf[0] += a; | |
255 buf[1] += b; | |
256 buf[2] += c; | |
257 buf[3] += d; | |
258 } | |
259 | |
260 /* lh3: the following code is added by me */ | |
261 | |
262 #ifdef MD5SUM_MAIN | |
263 #include <stdio.h> | |
264 #include <stdlib.h> | |
265 #include <string.h> | |
266 #define HEX_STR "0123456789abcdef" | |
267 | |
268 static void md5_one(const char *fn) | |
269 { | |
270 unsigned char buf[4096], digest[16]; | |
271 MD5_CTX md5; | |
272 int l; | |
273 FILE *fp; | |
274 | |
275 fp = strcmp(fn, "-")? fopen(fn, "r") : stdin; | |
276 if (fp == 0) { | |
277 fprintf(stderr, "md5sum: %s: No such file or directory\n", fn); | |
278 exit(1); | |
279 } | |
280 MD5Init(&md5); | |
281 while ((l = fread(buf, 1, 4096, fp)) > 0) | |
282 MD5Update(&md5, buf, l); | |
283 MD5Final(digest, &md5); | |
284 if (fp != stdin) fclose(fp); | |
285 for (l = 0; l < 16; ++l) | |
286 printf("%c%c", HEX_STR[digest[l]>>4&0xf], HEX_STR[digest[l]&0xf]); | |
287 printf(" %s\n", fn); | |
288 } | |
289 int main(int argc, char *argv[]) | |
290 { | |
291 int i; | |
292 if (argc == 1) md5_one("-"); | |
293 else for (i = 1; i < argc; ++i) md5_one(argv[i]); | |
294 return 0; | |
295 } | |
296 #endif |