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view PsiCLASS-1.0.2/samtools-0.1.19/bam_endian.h @ 0:903fc43d6227 draft default tip
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author | lsong10 |
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date | Fri, 26 Mar 2021 16:52:45 +0000 |
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#ifndef BAM_ENDIAN_H #define BAM_ENDIAN_H #include <stdint.h> static inline int bam_is_big_endian() { long one= 1; return !(*((char *)(&one))); } static inline uint16_t bam_swap_endian_2(uint16_t v) { return (uint16_t)(((v & 0x00FF00FFU) << 8) | ((v & 0xFF00FF00U) >> 8)); } static inline void *bam_swap_endian_2p(void *x) { *(uint16_t*)x = bam_swap_endian_2(*(uint16_t*)x); return x; } static inline uint32_t bam_swap_endian_4(uint32_t v) { v = ((v & 0x0000FFFFU) << 16) | (v >> 16); return ((v & 0x00FF00FFU) << 8) | ((v & 0xFF00FF00U) >> 8); } static inline void *bam_swap_endian_4p(void *x) { *(uint32_t*)x = bam_swap_endian_4(*(uint32_t*)x); return x; } static inline uint64_t bam_swap_endian_8(uint64_t v) { v = ((v & 0x00000000FFFFFFFFLLU) << 32) | (v >> 32); v = ((v & 0x0000FFFF0000FFFFLLU) << 16) | ((v & 0xFFFF0000FFFF0000LLU) >> 16); return ((v & 0x00FF00FF00FF00FFLLU) << 8) | ((v & 0xFF00FF00FF00FF00LLU) >> 8); } static inline void *bam_swap_endian_8p(void *x) { *(uint64_t*)x = bam_swap_endian_8(*(uint64_t*)x); return x; } #endif