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comparison galaxy_stubs/Predictor.xml @ 2:605370bc1def draft default tip

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author luis
date Tue, 12 Jul 2016 12:33:33 -0400
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1 <?xml version='1.0' encoding='UTF-8'?>
2 <!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
3 <!--Proposed Tool Section: [QuEasy (QSAR)]-->
4 <tool id="Predictor" name="Predictor" version="1.1.0">
5 <description>predict activities with QSAR model</description>
6 <macros>
7 <token name="@EXECUTABLE@">Predictor</token>
8 <import>macros.xml</import>
9 </macros>
10 <expand macro="stdio"/>
11 <expand macro="requirements"/>
12 <command>Predictor
13
14 #if $param_i:
15 -i $param_i
16 #end if
17 #if $param_dat:
18 -dat $param_dat
19 #end if
20 #if $param_o:
21 -o $param_o
22 #end if
23 </command>
24 <inputs>
25 <param name="param_i" type="data" format="mod" optional="False" value="&lt;class 'CTDopts.CTDopts._Null'&gt;" label="input mod-file" help="(-i) "/>
26 <param name="param_dat" type="data" format="dat" optional="False" value="&lt;class 'CTDopts.CTDopts._Null'&gt;" label="data-file containing prediction data set" help="(-dat) "/>
27 </inputs>
28 <expand macro="advanced_options"/>
29 <outputs>
30 <data name="param_o" format="txt"/>
31 </outputs>
32 <help>This tool predictes the response values of compounds in the given data-file using the specified QSAR model.
33
34 Input of this tool is a model-file as generated by ModelCreator or FeatureSelector and a data-file generated by InputReader.
35
36 Output of this tool (as specified by '-o') is a text file containing the predicted and, if any, the expected response values in one column each.
37 If you would prefer to use molecule files (sdf,mol2,drf) for input and output, please use the tool MolPredictor instead of this one.
38
39 </help>
40 </tool>