diff galaxy_stubs/InputPartitioner.xml @ 2:605370bc1def draft default tip

Uploaded
author luis
date Tue, 12 Jul 2016 12:33:33 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/galaxy_stubs/InputPartitioner.xml	Tue Jul 12 12:33:33 2016 -0400
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+<?xml version='1.0' encoding='UTF-8'?>
+<!--This is a configuration file for the integration of a tools into Galaxy (https://galaxyproject.org/). This file was automatically generated using CTD2Galaxy.-->
+<!--Proposed Tool Section: [QuEasy (QSAR)]-->
+<tool id="InputPartitioner" name="InputPartitioner" version="1.1.0">
+  <description>split QSAR data set     </description>
+  <macros>
+    <token name="@EXECUTABLE@">InputPartitioner</token>
+    <import>macros.xml</import>
+  </macros>
+  <expand macro="stdio"/>
+  <expand macro="requirements"/>
+  <command>InputPartitioner
+
+#if $param_i:
+  -i $param_i
+#end if
+#if $param_o:
+  -o $param_o
+#end if
+#if $param_n:
+  -n $param_n
+#end if
+</command>
+  <inputs>
+    <param name="param_i" type="data" format="dat" optional="False" value="&lt;class 'CTDopts.CTDopts._Null'&gt;" label="input data-file" help="(-i) "/>
+    <param name="param_n" type="integer" value="0" label="number of partitions" help="(-n) "/>
+  </inputs>
+  <expand macro="advanced_options"/>
+  <outputs>
+    <data name="param_o" format="dat"/>
+  </outputs>
+  <help>InputPartitioner partitions a given QSAR data set into n partitions with evenly distributed response values.
+Thus, this tool can be useful as part of a nested validation pipeline.
+Input is a data file as generated by InputReader.
+Output will be written to n files postfixed '_TRAIN&lt;i&gt;.dat' and '_TEST&lt;i&gt;.dat', where &lt;i&gt; is the ID of the resp. partition. For each of these partitions, the training set contains only those compounds that were not selected for the resp. test set.
+
+</help>
+</tool>