Mercurial > repos > malbuquerque > delly

diff package/tool_dependencies.xml @ 2:3bc83ccf41a4 draft

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author malbuquerque
date Tue, 20 Jan 2015 14:44:51 -0500
parents 5f241f2398c3
children b833f6538a4c
line wrap: on
line diff
--- a/package/tool_dependencies.xml	Tue Jan 20 14:21:53 2015 -0500
+++ b/package/tool_dependencies.xml	Tue Jan 20 14:44:51 2015 -0500
@@ -17,7 +17,11 @@
 			<install version="1.0">
 				<actions>
 					<action type="download_by_url">https://github.com/tobiasrausch/delly/archive/v0.6.1.tar.gz</action>
-					<action type="download_by_url">https://github.com/morinlab/galaxy_tools/delly/Makefile</action>
+					<action type="download_by_url">https://github.com/morinlab/galaxy_tools.git</action>
+					<action type="move_directory_files">
+						<source_directory>./galaxy_tools/delly/Makefile</source_directory>
+						<destination_directory>.</destination_directory>
+					</action>
 					<action type="shell_command">make all BOOST_ROOT=\$BOOST_ROOT BAMTOOLS_ROOT=\$BAMTOOLS_ROOT SEQTK_ROOT=\$SEQTK_ROOT</action>
 					<action type="move_directory_files">
 						<source_directory>.</source_directory>