Mercurial > repos > malbuquerque > delly

changeset 4:aedebcf9d2c2 draft

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Uploaded
author malbuquerque
date Tue, 20 Jan 2015 14:59:12 -0500
parents b833f6538a4c
children f7f19d0255e0
files package/tool_dependencies.xml
diffstat 1 files changed, 2 insertions(+), 6 deletions(-) [+]
line wrap: on
line diff
--- a/package/tool_dependencies.xml	Tue Jan 20 14:49:12 2015 -0500
+++ b/package/tool_dependencies.xml	Tue Jan 20 14:59:12 2015 -0500
@@ -1,7 +1,7 @@
 <?xml version="1.0"?>
 <tool_dependency>
 		
-		<package name="boost" version="1.53">
+		<package name="boost" version="1.53.0">
 			<repository changeset_revision="cee17eb9de41" name="package_boost_1_53" owner="iuc" toolshed="https://toolshed.g2.bx.psu.edu" />
 		</package>
 
@@ -17,11 +17,7 @@
 			<install version="1.0">
 				<actions>
 					<action type="download_by_url">https://github.com/tobiasrausch/delly/archive/v0.6.1.tar.gz</action>
-					<action type="shell_command">git clone https://github.com/morinlab/galaxy_tools.git</action>
-					<action type="move_directory_files">
-						<source_directory>./galaxy_tools/delly/Makefile</source_directory>
-						<destination_directory>.</destination_directory>
-					</action>
+					<action type="download_by_url">https://raw.githubusercontent.com/morinlab/galaxy_tools/master/delly/Makefile?token=AKBWDhpiQthVaz3plMQkg4ACAPGEQK1Wks5Ux-25wA%3D%3D</action>
 					<action type="shell_command">make all BOOST_ROOT=\$BOOST_ROOT BAMTOOLS_ROOT=\$BAMTOOLS_ROOT SEQTK_ROOT=\$SEQTK_ROOT</action>
 					<action type="move_directory_files">
 						<source_directory>.</source_directory>