Mercurial > repos > malbuquerque > package_bamtools_2_3_0

comparison tool_dependencies.xml @ 9:031f77d360ea draft

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Uploaded
author malbuquerque
date Wed, 21 Jan 2015 17:29:11 -0500
parents e6fbfcc95901
children c0572270b095
comparison
equal deleted inserted replaced
8:e6fbfcc95901 9:031f77d360ea
10 </package> 10 </package>
11 11
12 <package name="bamtools" version="2.3.0"> 12 <package name="bamtools" version="2.3.0">
13 <install version="1.0"> 13 <install version="1.0">
14 <actions> 14 <actions>
15 15
16 <action type="shell_command">pwd &gt; ~/whereami-2</action>
17
16 <action type="set_environment_for_install"> 18 <action type="set_environment_for_install">
17 <repository changeset_revision="782e014e71f9" name="package_cmake_3_1_0" owner="malbuquerque" toolshed="https://toolshed.g2.bx.psu.edu"> 19 <repository changeset_revision="782e014e71f9" name="package_cmake_3_1_0" owner="malbuquerque" toolshed="https://toolshed.g2.bx.psu.edu">
18 <package name="cmake" version="3.1.0" /> 20 <package name="cmake" version="3.1.0" />
19 </repository> 21 </repository>
20 </action> 22 </action>
21 23
24 <action type="shell_command">pwd &gt; ~/whereami-1</action>
25
22 <action type="set_environment_for_install"> 26 <action type="set_environment_for_install">
23 <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu"> 27 <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu">
24 <package name="samtools" version="0.1.18" /> 28 <package name="samtools" version="0.1.18" />
25 </repository> 29 </repository>
26 </action> 30 </action>
27 31
32 <action type="shell_command">pwd &gt; ~/whereami0</action>
28 <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action> 33 <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
29 <action type="shell_command">pwd &gt; ~/whereami</action> 34 <action type="shell_command">pwd &gt; ~/whereami</action>
30 <action type="shell_command">mkdir build</action> 35 <action type="shell_command">mkdir build</action>
31 <action type="shell_command">pwd &gt; ~/whereami2</action> 36 <action type="shell_command">pwd &gt; ~/whereami2</action>
32 <action type="change_directory">build</action> 37 <action type="change_directory">build</action>