Mercurial > repos > malbuquerque > package_bamtools_2_3_0

comparison tool_dependencies.xml @ 10:c0572270b095 draft

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Uploaded
author malbuquerque
date Wed, 21 Jan 2015 17:36:15 -0500
parents 031f77d360ea
children 390843b28bdd
comparison
equal deleted inserted replaced
9:031f77d360ea 10:c0572270b095
11 11
12 <package name="bamtools" version="2.3.0"> 12 <package name="bamtools" version="2.3.0">
13 <install version="1.0"> 13 <install version="1.0">
14 <actions> 14 <actions>
15 15
16 <action type="shell_command">pwd &gt; ~/whereami-2</action> 16 <action type="shell_command">pwd &gt; ~/TEST/whereami0</action>
17 17
18 <action type="set_environment_for_install"> 18 <action type="set_environment_for_install">
19 <repository changeset_revision="782e014e71f9" name="package_cmake_3_1_0" owner="malbuquerque" toolshed="https://toolshed.g2.bx.psu.edu"> 19 <repository changeset_revision="782e014e71f9" name="package_cmake_3_1_0" owner="malbuquerque" toolshed="https://toolshed.g2.bx.psu.edu">
20 <package name="cmake" version="3.1.0" /> 20 <package name="cmake" version="3.1.0" />
21 </repository> 21 </repository>
22 </action> 22 </action>
23 23
24 <action type="shell_command">pwd &gt; ~/whereami-1</action> 24 <action type="shell_command">pwd &gt; ~/TEST/whereami1</action>
25 25
26 <action type="set_environment_for_install"> 26 <action type="set_environment_for_install">
27 <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu"> 27 <repository changeset_revision="171cd8bc208d" name="package_samtools_0_1_18" owner="devteam" toolshed="https://toolshed.g2.bx.psu.edu">
28 <package name="samtools" version="0.1.18" /> 28 <package name="samtools" version="0.1.18" />
29 </repository> 29 </repository>
30 </action> 30 </action>
31 31
32 <action type="shell_command">pwd &gt; ~/whereami0</action> 32 <action type="shell_command">pwd &gt; ~/TEST/whereami2</action>
33 <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action> 33 <action type="download_by_url">https://github.com/pezmaster31/bamtools/archive/v2.3.0.tar.gz</action>
34 <action type="shell_command">pwd &gt; ~/whereami</action> 34 <action type="shell_command">pwd &gt; ~/TEST/whereami3</action>
35 <action type="shell_command">mkdir build</action> 35 <action type="shell_command">mkdir build</action>
36 <action type="shell_command">pwd &gt; ~/whereami2</action> 36 <action type="shell_command">pwd &gt; ~/TEST/whereami4</action>
37 <action type="change_directory">build</action> 37 <action type="change_directory">build</action>
38 <action type="shell_command">pwd &gt; ~/whereami3</action> 38 <action type="shell_command">pwd &gt; ~/TEST/whereami5</action>
39 <action type="shell_command">cmake ..</action> 39 <action type="shell_command">cmake ..</action>
40 <action type="shell_command">pwd &gt; ~/whereami4</action> 40 <action type="shell_command">pwd &gt; ~/TEST/whereami6</action>
41 <action type="shell_command">make</action> 41 <action type="shell_command">make</action>
42 <action type="shell_command">pwd &gt; ~/whereami5</action> 42 <action type="shell_command">pwd &gt; ~/TEST/whereami7</action>
43 <action type="change_directory">..</action> 43 <action type="change_directory">..</action>
44 <action type="shell_command">pwd &gt; ~/whereami6</action> 44 <action type="shell_command">pwd &gt; ~/TEST/whereami8</action>
45 45
46 <action type="move_directory_files"> 46 <action type="move_directory_files">
47 <source_directory>./</source_directory> 47 <source_directory>./</source_directory>
48 <destination_directory>$INSTALL_DIR</destination_directory> 48 <destination_directory>$INSTALL_DIR</destination_directory>
49 </action> 49 </action>