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comparison merge_flags.xml @ 2:caba07f41453 draft default tip

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"planemo upload for repository https://github.com/secimTools/SECIMTools/tree/main/galaxy commit 498abad641099412df56f04ff6e144e4193bbc34-dirty"
author malex
date Thu, 10 Jun 2021 15:41:17 +0000
parents 2e7d47c0b027
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1:2e7d47c0b027 2:caba07f41453
40 The merging requirements are: 40 The merging requirements are:
41 41
42 (1) the number of rows should be the same in all files being merged and 42 (1) the number of rows should be the same in all files being merged and
43 (2) all files should contain the same unique ID column name to merge by. 43 (2) all files should contain the same unique ID column name to merge by.
44 44
45 **Note:** More broadly, the tool can merge non-metabolomics data as long ast he above requirements are met. 45 **Note:** More broadly, the tool can merge non-metabolomics data as long as the above requirements are met.
46 46
47 47
48 -------------------------------------------------------------------------------- 48 --------------------------------------------------------------------------------
49 49
50 **Input** 50 **Input**
51 51
52 - Two or more datasets are required. 52 - Two or more datasets are required.
53
54 **Note:** If the input flag files have the same flag column name in multiple files, the merged output file will have columns from all imputed files.
55 To distinguish columns obtained from different files, column names will be altered by appending the corresponding file name to the end of the column name.
56 All non-supported file name characters will be changed to ‘_’.
53 57
54 @WIDE@ 58 @WIDE@
55 59
56 **NOTE:** The sample IDs must match the sample IDs in the Design File (below). 60 **NOTE:** The sample IDs must match the sample IDs in the Design File (below).
57 Extra columns will automatically be ignored. 61 Extra columns will automatically be ignored.
67 71
68 **Output** 72 **Output**
69 73
70 The TSV output contains all columns from the flag files. The column with the unique row ID will be included once in the output dataset. 74 The TSV output contains all columns from the flag files. The column with the unique row ID will be included once in the output dataset.
71 75
72 **Note:** If the input flag files have the same flag column name in multiple files, the merged file will have columns from all imputed files.
73 To distinguish columns obtained from different files, column names will be altered by appending the corresponding file name to the end of the column name.
74 All non-supported file name characters will be changed to ‘_’.
75
76 76
77 ]]></help> 77 ]]></help>
78 <expand macro="citations"/> 78 <expand macro="citations"/>
79 </tool> 79 </tool>