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comparison ttest_perm.xml @ 2:caba07f41453 draft default tip

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"planemo upload for repository https://github.com/secimTools/SECIMTools/tree/main/galaxy commit 498abad641099412df56f04ff6e144e4193bbc34-dirty"
author malex
date Thu, 10 Jun 2021 15:41:17 +0000
parents 2e7d47c0b027
children
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1:2e7d47c0b027 2:caba07f41453
12 --group $group 12 --group $group
13 --reps $reps 13 --reps $reps
14 --summaries $summaries 14 --summaries $summaries
15 --flags $flags 15 --flags $flags
16 --volcano $volcano 16 --volcano $volcano
17 </command> 17 ]]></command>
18 <inputs> 18 <inputs>
19 <param name="input" type="data" format="tabular" label="Wide Dataset" help="Input dataset in wide format and tab separated. If file is not tab separated see TIP below."/> 19 <param name="input" type="data" format="tabular" label="Wide Dataset" help="Input your tab-separated wide format dataset. If file is not tab separated see TIP below."/>
20 <param name="design" type="data" format="tabular" label="Design File" help="Design file tab separated. Note you need a 'sampleID' column. If not tab separated see TIP below."/> 20 <param name="design" type="data" format="tabular" label="Design File" help="Input your design file (tab-separated). Note you need a 'sampleID' column. If not tab separated see TIP below."/>
21 <param name="uniqueID" type="text" size="30" value="" label="Unique Feature ID" help="Name of the column in your Wide Dataset that has unique Feature IDs."/> 21 <param name="uniqueID" type="text" size="30" value="" label="Unique Feature ID" help="Name of the column in your wide dataset that has unique identifiers."/>
22 <param name="group" type="text" size="30" label="Group/Treatment" help="Name of the column in your Design File that contains group classifications."/> 22 <param name="group" type="text" size="30" label="Group/Treatment" help="Name of the column in your design file that contains group classifications."/>
23 <param name="reps" type="text" size="30" value="" label ="Iteration Number." help="Enter the number of iterations you want to carry out."/> 23 <param name="reps" type="text" size="30" value="" label ="Iteration Number." help="Enter the number of iterations you want to carry out."/>
24 </inputs> 24 </inputs>
25 <outputs> 25 <outputs>
26 <data format="tabular" name="summaries" label="${tool.name} on ${on_string}: Summaries that include p-values and mean differences."/> 26 <data format="tabular" name="summaries" label="${tool.name} on ${on_string}: Summaries that include p-values and mean differences."/>
27 <data format="tabular" name="flags" label="${tool.name} on ${on_string}: Flags that include 0.01, 0.05 and 0.10 significance levels for the differences. "/> 27 <data format="tabular" name="flags" label="${tool.name} on ${on_string}: Flags that include 0.01, 0.05 and 0.10 significance levels for the differences. "/>