Mercurial > repos > mandorodriguez > fastqdump_paired

changeset 1:3c39bed00a4c draft

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Uploaded
author mandorodriguez
date Tue, 06 Oct 2015 14:33:40 -0400
parents 4a455773d235
children 2ff0cde149b1
files fastq_dump_paired.xml
diffstat 1 files changed, 3 insertions(+), 3 deletions(-) [+]
line wrap: on
line diff
--- a/fastq_dump_paired.xml	Mon Sep 28 12:53:10 2015 -0400
+++ b/fastq_dump_paired.xml	Tue Oct 06 14:33:40 2015 -0400
@@ -1,4 +1,4 @@
-<tool id="fastq_dump_paired" name="FASTQ Dump paired downloader" version="1.0">
+<tool id="fastq_dump_paired" name="FASTQ Dump paired downloader" version="1.1">
     <description>Downloads a set of paired reads by their accession number using fastq-dump tool from sra-toolkit.</description>
     <requirements>
        <!-- Should just use the samtools that's installed in the path -->
@@ -17,9 +17,9 @@
         <param name="accession_number" size="10" type="text" value="" label="Accession Number"/>
     </inputs>
     <outputs>
-       <data format="fastq" label="${tool.name} on ${on_string}: Forward Reads" name="forward_reads" from_work_dir="R1.fastq" >
+       <data format="fastqsanger" label="${tool.name} on ${on_string}: Forward Reads" name="forward_reads" from_work_dir="R1.fastq" >
        </data>
-       <data format="fastq" label="${tool.name} on ${on_string}: Reverse Reads" name="reverse_reads" from_work_dir="R2.fastq" >
+       <data format="fastqsanger" label="${tool.name} on ${on_string}: Reverse Reads" name="reverse_reads" from_work_dir="R2.fastq" >
        </data>
     </outputs>