Mercurial > repos > marcel > caddsuite_linux_x86_64

annotate CADDSuite/galaxyconfigs/tools/EvenSplit.xml @ 0:bac3c274238f

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Migrated tool version 0.93 from old tool shed archive to new tool shed repository
author marcel
date Tue, 07 Jun 2011 16:43:30 -0400
parents
children 867bf9f815a0
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bac3c274238f Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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1
bac3c274238f Migrated tool version 0.93 from old tool shed archive to new tool shed repository
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2 <!--This is a configuration file for the integration of a CADDSuite tool into Galaxy (http://usegalaxy.org). This file was automatically generated using GalaxyConfigGenerator, so do not bother to make too many manual modifications.-->
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3 <tool id="evensplit" name="EvenSplit" version="0.93">
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4 <description>generate splits w/ equal property range</description>
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5 <command interpreter="bash"><![CDATA[../../EvenSplit
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6 #if str( $i ) != '' and str( $i ) != 'None' :
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7 -i "$i"
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8 #end if
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9 #if str( $o1 ) != '' and str( $o1 ) != 'None' :
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10 -o1 "$o1"
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11 #end if
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12 #if str( $o2 ) != '' and str( $o2 ) != 'None' :
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13 -o2 "$o2"
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14 #end if
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15 #if str( $n ) != '' and str( $n ) != 'None' :
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16 -n "$n"
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17 #end if
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18 #if str( $offset ) != '' and str( $offset ) != 'None' :
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19 -offset "$offset"
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20 #end if
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21 #if str( $k ) != '' and str( $k ) != 'None' :
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22 -k "$k"
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23 #end if
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24 #if str( $prop ) != '' and str( $prop ) != 'None' :
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25 -prop "$prop"
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26 #end if
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27 | tail -n 5
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28 ]]></command>
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29 <inputs>
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30 <param name="i" label="input file" optional="false" type="data" format="mol2/sdf/drf"/>
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31 <param name="n" label="number of compounds to use from input file" optional="true" type="text" area="true" size="1x5" value=""/>
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32 <param name="offset" label="extract each (i+offset)%k == 0 for o2" optional="true" type="text" area="true" size="1x5" value="0"/>
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33 <param name="k" label="extract each k'th compound for 2nd output file" optional="true" type="text" area="true" size="1x5" value="2"/>
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34 <param name="prop" label="property name" optional="false" area="true" type="text" size="1x15"/>
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35 </inputs>
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36 <outputs>
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37 <data name="o1" format="mol2/sdf/drf" format_source="i"/>
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38 <data name="o2" format="mol2/sdf/drf" format_source="i"/>
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39 </outputs>
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40 <help>This tool splits a molecule file into two subsets in such a way that each of them convers an equal range of a property. The property with respect to which this is to be done should be specified with '-prop'.</help>
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41 </tool>