Mercurial > repos > marcel > caddsuite_linux_x86_64
comparison CADDSuite-1.6/data/fragments/ALA.db @ 17:25a03362403c draft
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author | marcel |
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date | Sat, 15 Dec 2012 13:10:41 -0500 |
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16:1a24aef40d01 | 17:25a03362403c |
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1 <node>ALA | |
2 <node>Names | |
3 <node>Alanine</node> | |
4 <node>Alanin</node> | |
5 <node>Ala</node> | |
6 <node>A</node> | |
7 </node> | |
8 <node>Atoms | |
9 <node>N<value>N 0.09952427 1.425946 -0.01392276</value></node> | |
10 <node>3H<value>H 0.9122966 2.021833 0.09543685</value></node> | |
11 <node>CA<value>C -0.6343572 1.904422 -1.199327</value></node> | |
12 <node>HA<value>H -0.06613517 1.608824 -2.082189</value></node> | |
13 <node>C<value>C -0.7061328 3.434369 -1.195026</value></node> | |
14 <node>O<value>O 0.2770563 4.020259 -0.6877273</value></node> | |
15 <node>CB<value>C -2.018631 1.250585 -1.273356</value></node> | |
16 <node>1HB<value>H -2.525042 1.535779 -2.196084</value></node> | |
17 <node>2HB<value>H -1.909473 0.1656088 -1.256012</value></node> | |
18 <node>3HB<value>H -2.621985 1.560564 -0.4192078</value></node> | |
19 <node>OXT<value>O -1.554726 3.968913 -1.942107</value></node> | |
20 <node>1H<value>H -0.4859746 1.514033 0.8043322</value></node> | |
21 <node>2H<value>H 0.3756785 0.4622824 -0.137128</value></node> | |
22 </node> | |
23 <node>Bonds | |
24 <node>5<value>3H N s</value></node> | |
25 <node>6<value>CA N s</value></node> | |
26 <node>10<value>HA CA s</value></node> | |
27 <node>11<value>C CA s</value></node> | |
28 <node>14<value>O C d</value></node> | |
29 <node>15<value>CB CA s</value></node> | |
30 <node>19<value>1HB CB s</value></node> | |
31 <node>20<value>2HB CB s</value></node> | |
32 <node>21<value>3HB CB s</value></node> | |
33 <node>22<value>OXT C s</value></node> | |
34 <node>23<value>1H N s</value></node> | |
35 <node>24<value>2H N s</value></node> | |
36 </node> | |
37 <node>Connections | |
38 <node>N-term<value>N C-term s 1.33 0.5</value></node> | |
39 <node>C-term<value>C N-term s 1.33 0.5</value></node> | |
40 </node> | |
41 <node>Properties | |
42 <node>AMINO_ACID</node> | |
43 </node> | |
44 <node>Variants | |
45 <node>Default | |
46 <node>Delete | |
47 <node>OXT<value></value></node> | |
48 <node>1H<value></value></node> | |
49 <node>2H<value></value></node> | |
50 </node> | |
51 <node>Rename | |
52 <node>3H<value>H</value></node> | |
53 </node> | |
54 </node> | |
55 <node>ALA-M | |
56 <node>Properties | |
57 <node>C_TERMINAL</node> | |
58 <node>N_TERMINAL</node> | |
59 </node> | |
60 </node> | |
61 <node>ALA-C | |
62 <node>Delete | |
63 <node>1H<value></value></node> | |
64 <node>2H<value></value></node> | |
65 </node> | |
66 <node>Rename | |
67 <node>3H<value>H</value></node> | |
68 </node> | |
69 <node>Properties | |
70 <node>C_TERMINAL</node> | |
71 </node> | |
72 </node> | |
73 <node>ALA-N | |
74 <node>Delete | |
75 <node>OXT<value></value></node> | |
76 </node> | |
77 <node>Properties | |
78 <node>N_TERMINAL</node> | |
79 </node> | |
80 </node> | |
81 </node> | |
82 </node> |