diff CADDSuite-1.0.1/data/OpenBabel/gaff.dat @ 9:2cff9609f2c7

Uploaded
author marcel
date Tue, 15 Nov 2011 10:40:26 -0500
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children
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/CADDSuite-1.0.1/data/OpenBabel/gaff.dat	Tue Nov 15 10:40:26 2011 -0500
@@ -0,0 +1,5169 @@
+AMBER General Force Field for organic mol., add. info. at the end (June, 2003)
+c  12.01         0.616               Sp2 C carbonyl group 
+c1 12.01         0.360               Sp C
+c2 12.01         0.360               Sp2 C  
+c3 12.01         0.878               Sp3 C
+ca 12.01         0.360               Sp2 C in pure aromatic systems
+cp 12.01         0.360               Head Sp2 C that connect two rings in biphenyl sys. 
+cq 12.01         0.360               Head Sp2 C that connect two rings in biphenyl sys. identical to cp 
+cc 12.01         0.360               Sp2 carbons in non-pure aromatic systems
+cd 12.01         0.360               Sp2 carbons in non-pure aromatic systems, identical to cc
+ce 12.01         0.360               Inner Sp2 carbons in conjugated systems
+cf 12.01         0.360               Inner Sp2 carbons in conjugated systems, identical to ce
+cg 12.01         0.360               Inner Sp carbons in conjugated systems
+ch 12.01         0.360               Inner Sp carbons in conjugated systems, identical to cg
+cx 12.01         0.360               Sp3 carbons in triangle systems
+cy 12.01         0.360               Sp3 carbons in square systems
+cu 12.01         0.360               Sp2 carbons in triangle systems
+cv 12.01         0.360               Sp2 carbons in square systems
+h1 1.008         0.135               H bonded to aliphatic carbon with 1 electrwd. group  
+h2 1.008         0.135               H bonded to aliphatic carbon with 2 electrwd. group 
+h3 1.008         0.135               H bonded to aliphatic carbon with 3 electrwd. group 
+h4 1.008         0.135               H bonded to non-sp3 carbon with 1 electrwd. group 
+h5 1.008         0.135               H bonded to non-sp3 carbon with 2 electrwd. group 
+ha 1.008         0.135               H bonded to aromatic carbon  
+hc 1.008         0.135               H bonded to aliphatic carbon without electrwd. group 
+hn 1.008         0.161               H bonded to nitrogen atoms
+ho 1.008         0.135               Hydroxyl group
+hp 1.008         0.135               H bonded to phosphate 
+hs 1.008         0.135               Hydrogen bonded to sulphur 
+hw 1.008         0.135               Hydrogen in water 
+hx 1.008         0.135               H bonded to C next to positively charged group  
+f  19.00         0.320               Fluorine
+cl 35.45         1.910               Chlorine 
+br 79.90         2.880               Bromine 
+i  126.9         4.690               Iodine 
+n  14.01         0.530               Sp2 nitrogen in amide groups
+n1 14.01         0.530               Sp N  
+n2 14.01         0.530               aliphatic Sp2 N with two connected atoms 
+n3 14.01         0.530               Sp3 N with three connected atoms
+n4 14.01         0.530               Sp3 N with four connected atoms 
+na 14.01         0.530               Sp2 N with three connected atoms 
+nb 14.01         0.530               Sp2 N in pure aromatic systems 
+nc 14.01         0.530               Sp2 N in non-pure aromatic systems
+nd 14.01         0.530               Sp2 N in non-pure aromatic systems, identical to nc
+ne 14.01         0.530               Inner Sp2 N in conjugated systems
+nf 14.01         0.530               Inner Sp2 N in conjugated systems, identical to ne
+nh 14.01         0.530               Amine N connected one or more aromatic rings 
+no 14.01         0.530               Nitro N  
+o  16.00         0.434               Oxygen with one connected atom
+oh 16.00         0.465               Oxygen in hydroxyl group
+os 16.00         0.465               Ether and ester oxygen
+ow 16.00         0.465               Oxygen in water 
+p2 30.97         1.538               Phosphate with two connected atoms 
+p3 30.97         1.538               Phosphate with three connected atoms, such as PH3
+p4 30.97         1.538               Phosphate with three connected atoms, such as O=P(CH3)2
+p5 30.97         1.538               Phosphate with four connected atoms, such as O=P(OH)3
+pb 30.97         1.538               Sp2 P in pure aromatic systems 
+pc 30.97         1.538               Sp2 P in non-pure aromatic systems
+pd 30.97         1.538               Sp2 P in non-pure aromatic systems, identical to pc
+pe 30.97         1.538               Inner Sp2 P in conjugated systems
+pf 30.97         1.538               Inner Sp2 P in conjugated systems, identical to pe
+px 30.97         1.538               Special p4 in conjugated systems
+py 30.97         1.538               Special p5 in conjugated systems
+s  32.06         2.900               S with one connected atom 
+s2 32.06         2.900               S with two connected atom, involved at least one double bond  
+s4 32.06         2.900               S with three connected atoms 
+s6 32.06         2.900               S with four connected atoms 
+sh 32.06         2.900               Sp3 S connected with hydrogen 
+ss 32.06         2.900               Sp3 S in thio-ester and thio-ether
+sx 32.06         2.900               Special s4 in conjugated systems
+sy 32.06         2.900               Special s6 in conjugated systems
+
+hn  ho  hs  n   na  nc  nd  ne  nf  n2  n3  n4  o   oh  os  ow  sh  ss
+ow-hw  553.0    0.9572      TIP3P water  
+br-br  123.2    2.542        SOURCE1     4    0.0000    0.0000
+br-c   240.3    1.946        SOURCE2     2    0.0285    0.0285
+br-c1  352.7    1.787        SOURCE2     4    0.0022    0.0024
+br-c2  278.7    1.883        SOURCE1    31    0.0000    0.0000
+br-c3  229.5    1.966        SOURCE1   100    0.0000    0.0000
+br-ca  269.6    1.897        SOURCE1   127    0.0028    0.0058
+br-cx  261.4    1.910        SOURCE1     8    0.0000    0.0000
+br-i   142.4    2.671        SOURCE1     2    0.0245    0.0245
+br-n   320.2    1.873        SOURCE3     4    0.0037    0.0046
+br-n1  330.4    1.860        SOURCE0     1                    
+br-n2  219.0    2.038        SOURCE3     5    0.0956    0.1082
+br-n3  265.9    1.952        SOURCE3     2    0.0000    0.0000
+br-n4  282.4    1.926        SOURCE3     3    0.0012    0.0013
+br-na  237.3    2.002        SOURCE3     7    0.1938    0.2156
+br-nh  270.9    1.944        SOURCE3     1    0.0000    0.0000
+br-no  191.0    2.101        SOURCE3     1    0.0000    0.0000
+br-o   278.9    1.800        SOURCE0     1                    
+br-oh  237.2    1.866        SOURCE3     1    0.0000    0.0000
+br-os  225.6    1.887        SOURCE3     2    0.0000    0.0000
+br-p2  174.3    2.210        SOURCE3     9    0.0470    0.0510
+br-p3  167.0    2.231        SOURCE3     3    0.0096    0.0101
+br-p4  188.8    2.171        SOURCE0     1                    
+br-p5  179.3    2.196        SOURCE3     3    0.0094    0.0099
+br-s   170.6    2.220        SOURCE0     1                    
+br-s4  134.3    2.341        SOURCE3     1    0.0000    0.0000
+br-s6  172.7    2.214        SOURCE3     3    0.0417    0.0443
+br-sh  174.4    2.209        SOURCE3     1    0.0000    0.0000
+br-ss  176.6    2.203        SOURCE3     3    0.0033    0.0035
+c -c   290.1    1.550        SOURCE1    31    0.0080    0.0100
+c -c1  379.8    1.460        SOURCE0     1                    
+c -c2  449.9    1.406        SOURCE3     2    0.0370    0.0370
+c -c3  328.3    1.508        SOURCE1  2949    0.0049    0.0060
+c -ca  349.7    1.487        SOURCE1   480    0.0031    0.0055
+c -cc  377.4    1.462        SOURCE3   132    0.0165    0.0210
+c -cd  377.4    1.462        SOURCE3   132    0.0165    0.0210
+c -ce  363.8    1.474        SOURCE1   601    0.0091    0.0105
+c -cf  363.8    1.474        SOURCE1   601    0.0091    0.0105
+c -cg  389.3    1.452        SOURCE3     2    0.0000    0.0000
+c -ch  389.3    1.452        SOURCE3     2    same as    c -cg
+c -cl  293.5    1.766        SOURCE3     6    0.0235    0.0250
+c -cu  441.4    1.412        SOURCE2     1    0.0000    0.0000
+c -cx  350.8    1.486        SOURCE1   105    0.0000    0.0000
+c -cy  308.5    1.529        SOURCE1    18    0.0000    0.0000
+c -f   387.9    1.325        SOURCE2     6    0.0140    0.0147
+c -ha  325.1    1.101        SOURCE3    53    0.0078    0.0102
+c -i   198.9    2.209        SOURCE3     4    0.0332    0.0365
+c -n   478.2    1.345        SOURCE1  1235    0.0162    0.0215
+c -n2  374.6    1.420        SOURCE0     1                    
+c -n4  255.5    1.546        SOURCE3     4    0.0388    0.0388
+c -nc  438.8    1.371        SOURCE3     2    0.0108    0.0108
+c -nd  438.8    1.371        SOURCE3     2    same as    c -nc
+c -ne  388.0    1.409        SOURCE3     3    0.0088    0.0094
+c -nf  388.0    1.409        SOURCE3     3    same as    c -ne
+c -no  260.1    1.540        SOURCE0     1                    
+c -o   648.0    1.214        SOURCE1  3682    0.0134    0.0165
+c -oh  466.4    1.306        SOURCE1   271    0.0026    0.0041
+c -os  411.3    1.343        SOURCE1  1044    0.0114    0.0171
+c -p2  210.3    1.900        SOURCE0     1                    
+c -p3  219.0    1.883        SOURCE3     6    0.0094    0.0129
+c -p4  220.6    1.880        SOURCE0     1                    
+c -p5  225.9    1.870        SOURCE0     1                    
+c -pe  204.9    1.911        SOURCE3     3    0.0023    0.0025
+c -pf  204.9    1.911        SOURCE3     3    same as    c -pe
+c -px  208.3    1.904        SOURCE3     1    0.0000    0.0000
+c -py  227.6    1.867        SOURCE3     6    0.0141    0.0199
+c -s   328.9    1.675        SOURCE1   401    0.0077    0.0128
+c -s4  200.4    1.870        SOURCE0     1                    
+c -s6  200.4    1.870        SOURCE0     1                    
+c -sh  249.6    1.781        SOURCE3     6    0.0157    0.0171
+c -ss  261.9    1.762        SOURCE1    20    0.0000    0.0000
+c -sx  193.3    1.885        SOURCE3     5    0.0070    0.0088
+c -sy  202.8    1.865        SOURCE3     5    0.0063    0.0085
+c1-c1  986.2    1.181        SOURCE1   265    0.0022    0.0031
+c1-c2  625.0    1.307        SOURCE1    18    0.0000    0.0000
+c1-c3  368.3    1.470        SOURCE1   215    0.0013    0.0017
+c1-ca  404.1    1.440        SOURCE0     1                    
+c1-cg  845.8    1.222        SOURCE3    22    0.0074    0.0101
+c1-ch  845.8    1.222        SOURCE3    22    same as    c1-cg
+c1-cl  419.7    1.631        SOURCE2     6    0.0046    0.0050
+c1-cx  399.1    1.444        SOURCE1    38    0.0000    0.0000
+c1-f   469.4    1.270        SOURCE2     2    0.0085    0.0085
+c1-ha  375.9    1.066        SOURCE3    63    0.0022    0.0035
+c1-hc  385.6    1.060        SOURCE0     1                    
+c1-i   318.8    1.989        SOURCE2     4    0.0025    0.0032
+c1-n   503.0    1.330        SOURCE0     1                    
+c1-n1 1014.5    1.138        SOURCE1   170    0.0038    0.0055
+c1-n2  769.8    1.210        SOURCE3     5    0.0089    0.0115
+c1-n3  409.8    1.392        SOURCE2     1    0.0000    0.0000
+c1-n4  378.2    1.417        SOURCE3     3    0.0030    0.0032
+c1-na  452.0    1.362        SOURCE3     8    0.0031    0.0034
+c1-ne  741.8    1.220        SOURCE3     1    0.0000    0.0000
+c1-nf  741.8    1.220        SOURCE3     1    same as    c1-ne
+c1-ng  465.7    1.353        SOURCE3     3    0.0025    0.0027
+c1-nh  465.7    1.353        SOURCE3     3    0.0025    0.0027
+c1-no  393.0    1.405        SOURCE3     3    0.0004    0.0005
+c1-o   777.0    1.166        SOURCE2     9    0.0044    0.0052
+c1-oh  435.6    1.326        SOURCE3     1    0.0000    0.0000
+c1-os  437.1    1.325        SOURCE3     3    0.0139    0.0148
+c1-p2  289.3    1.770        SOURCE0     1                    
+c1-p3  275.1    1.790        SOURCE0     1                    
+c1-p4  275.1    1.790        SOURCE0     1                    
+c1-p5  302.2    1.753        SOURCE3     2    0.0000    0.0000
+c1-s   371.8    1.630        SOURCE1    14    0.0000    0.0000
+c1-s2  410.0    1.595        SOURCE3     1    0.0000    0.0000
+c1-s4  272.9    1.746        SOURCE3     2    0.0000    0.0000
+c1-s6  290.4    1.722        SOURCE3     2    0.0000    0.0000
+c1-sh  324.5    1.680        SOURCE0     1                    
+c1-ss  325.4    1.679        SOURCE1    10    0.0000    0.0000
+c2-c2  589.7    1.324        SOURCE1   974    0.0048    0.0096
+c2-c3  328.3    1.508        SOURCE1  2536    0.0016    0.0021
+c2-ca  357.2    1.480        SOURCE0     1                    
+c2-cc  522.6    1.360        SOURCE1   771    0.0152    0.0185
+c2-cd  522.6    1.360        SOURCE1   771    0.0152    0.0185
+c2-ce  560.5    1.339        SOURCE3    62    0.0085    0.0128
+c2-cf  560.5    1.339        SOURCE3    62    same as    c2-ce
+c2-cl  328.8    1.722        SOURCE1   163    0.0093    0.0098
+c2-cu  573.9    1.332        SOURCE2     1    0.0000    0.0000
+c2-cx  333.3    1.503        SOURCE2     1    0.0000    0.0000
+c2-cy  309.4    1.528        SOURCE2     1    0.0000    0.0000
+c2-f   368.7    1.340        SOURCE1    34    0.0000    0.0000
+c2-h4  348.6    1.084        SOURCE3    40    0.0037    0.0058
+c2-h5  357.5    1.078        SOURCE3     3    0.0061    0.0067
+c2-ha  344.3    1.087        SOURCE3   797    0.0030    0.0046
+c2-hc  344.3    1.087        SOURCE3   789    0.0030    0.0046
+c2-hx  350.1    1.083        SOURCE3     3    0.0008    0.0008
+c2-i   223.2    2.153        SOURCE3     2    0.0000    0.0000
+c2-n   390.5    1.407        SOURCE3     9    0.0109    0.0124
+c2-n1  546.0    1.306        SOURCE3     4    0.0161    0.0161
+c2-n2  581.1    1.288        SOURCE1   103    0.0095    0.0100
+c2-n3  486.3    1.340        SOURCE0     1                    
+c2-n4  309.1    1.482        SOURCE3     5    0.0047    0.0064
+c2-na  411.1    1.391        SOURCE3    31    0.0271    0.0289
+c2-nc  533.0    1.313        SOURCE1    99    0.0065    0.0095
+c2-nd  533.0    1.313        SOURCE1    99    same as    c2-nc
+c2-ne  597.7    1.280        SOURCE3    37    0.0090    0.0110
+c2-nf  597.7    1.280        SOURCE3    37    same as    c2-ne
+c2-nh  462.6    1.355        SOURCE3    38    0.0385    0.0413
+c2-no  327.6    1.463        SOURCE3     4    0.0013    0.0013
+c2-o   546.2    1.261        SOURCE3     4    0.0144    0.0144
+c2-oh  425.4    1.333        SOURCE1    53    0.0000    0.0000
+c2-os  392.6    1.357        SOURCE1   315    0.0088    0.0097
+c2-p2  375.9    1.670        SOURCE3    62    0.0078    0.0147
+c2-p3  246.6    1.834        SOURCE3     5    0.0041    0.0042
+c2-p4  254.0    1.822        SOURCE0     1                    
+c2-p5  255.2    1.820        SOURCE0     1                    
+c2-pe  355.3    1.691        SOURCE3    52    0.0318    0.0542
+c2-pf  355.3    1.691        SOURCE3    52    same as    c2-pe
+c2-s   281.5    1.734        SOURCE3     4    0.0034    0.0034
+c2-s2  393.1    1.610        SOURCE2     1    0.0000    0.0000
+c2-s4  263.2    1.760        SOURCE0     1                    
+c2-s6  263.2    1.760        SOURCE0     1                    
+c2-sh  255.3    1.772        SOURCE3     3    0.0068    0.0072
+c2-ss  280.0    1.736        SOURCE1   209    0.0135    0.0155
+c3-c3  303.1    1.535        SOURCE1 14664    0.0043    0.0048
+c3-ca  323.5    1.513        SOURCE1  1813    0.0000    0.0000
+c3-cc  337.3    1.499        SOURCE3    50    0.0059    0.0096
+c3-cd  337.3    1.499        SOURCE3    50    0.0059    0.0096
+c3-ce  331.3    1.505        SOURCE3     9    0.0019    0.0024
+c3-cf  331.3    1.505        SOURCE3     9    same as    c3-ce
+c3-cl  279.0    1.786        SOURCE1   267    0.0151    0.0194
+c3-cu  359.4    1.478        SOURCE1     7    0.0000    0.0000
+c3-cv  347.6    1.489        SOURCE1    11    0.0000    0.0000
+c3-cx  322.5    1.514        SOURCE1   712    0.0044    0.0045
+c3-cy  308.5    1.529        SOURCE1   376    0.0000    0.0000
+c3-f   363.8    1.344        SOURCE1   617    0.0241    0.0281
+c3-h1  335.9    1.093        SOURCE3  2175    0.0045    0.0082
+c3-h2  326.4    1.100        SOURCE3    66    0.0110    0.0280
+c3-h3  335.9    1.093        SOURCE2     1    0.0000    0.0000
+c3-hc  337.3    1.092        SOURCE3  2815    0.0040    0.0059
+c3-hx  338.7    1.091        SOURCE3   146    0.0023    0.0066
+c3-i   219.1    2.162        SOURCE1    15    0.0000    0.0000
+c3-n   330.6    1.460        SOURCE1   187    0.0065    0.0079
+c3-n1  325.1    1.470        SOURCE3
+c3-n2  313.8    1.477        SOURCE1   129    0.0136    0.0138
+c3-n3  320.6    1.470        SOURCE1  1678    0.0013    0.0017
+c3-n4  293.6    1.499        SOURCE1  1370    0.0000    0.0000
+c3-na  334.7    1.456        SOURCE3    23    0.0096    0.0119
+c3-nc  334.7    1.456        SOURCE3     9    0.0091    0.0109
+c3-nd  334.7    1.456        SOURCE3     9    same as    c3-nc
+c3-nh  332.7    1.458        SOURCE3    27    0.0067    0.0085
+c3-no  265.4    1.533        SOURCE1    83    0.0163    0.0212
+c3-o   422.6    1.335        SOURCE3     4    0.0100    0.0100
+c3-oh  314.1    1.426        SOURCE1   914    0.0110    0.0129
+c3-os  301.5    1.439        SOURCE1  3123    0.0112    0.0126
+c3-p2  234.3    1.855        SOURCE3     9    0.0100    0.0125
+c3-p3  240.6    1.844        SOURCE3   109    0.0091    0.0107
+c3-p4  247.2    1.833        SOURCE3    29    0.0091    0.0138
+c3-p5  259.7    1.813        SOURCE1    84    0.0000    0.0000
+c3-px  252.7    1.824        SOURCE3    28    0.0079    0.0098
+c3-py  259.7    1.813        SOURCE3    13    0.0144    0.0163
+c3-s   212.9    1.845        SOURCE3     4    0.0185    0.0185
+c3-s4  233.8    1.807        SOURCE1   139    0.0022    0.0023
+c3-s6  254.0    1.774        SOURCE1   118    0.0080    0.0103
+c3-sh  225.3    1.822        SOURCE3    12    0.0042    0.0051
+c3-ss  225.8    1.821        SOURCE1   358    0.0049    0.0075
+c3-sx  232.6    1.809        SOURCE3    30    0.0050    0.0067
+c3-sy  248.9    1.782        SOURCE3    31    0.0034    0.0039
+ca-ca  478.4    1.387        SOURCE1  6228    0.0096    0.0147
+ca-cc  411.7    1.434        SOURCE1    80    0.0000    0.0000
+ca-cd  411.7    1.434        SOURCE1    80    0.0000    0.0000
+ca-ce  366.0    1.472        SOURCE1    71    0.0029    0.0030
+ca-cf  366.0    1.472        SOURCE1    71    0.0029    0.0030
+ca-cg  406.6    1.438        SOURCE1    71    0.0045    0.0045
+ca-ch  406.6    1.438        SOURCE1    71    0.0045    0.0045
+ca-cl  322.8    1.729        SOURCE1   704    0.0095    0.0095
+ca-cp  466.1    1.395        SOURCE3    14    0.0098    0.0110
+ca-cx  350.8    1.486        SOURCE1    98    0.0064    0.0118
+ca-f   363.8    1.344        SOURCE1   205    0.0069    0.0089
+ca-h4  342.9    1.088        SOURCE3    57    0.0016    0.0026
+ca-h5  347.2    1.085        SOURCE3    15    0.0038    0.0048
+ca-ha  344.3    1.087        SOURCE3  1496    0.0024    0.0045
+ca-i   252.4    2.095        SOURCE1    51    0.0000    0.0000
+ca-n   372.3    1.422        SOURCE3     9    0.0092    0.0098
+ca-n1  398.1    1.400        SOURCE3
+ca-n2  320.6    1.470        SOURCE2     1    0.0000    0.0000
+ca-n4  325.6    1.465        SOURCE1    23    0.0000    0.0000
+ca-na  470.3    1.350        SOURCE1   150    0.0091    0.0103
+ca-nb  483.1    1.342        SOURCE3   104    0.0052    0.0076
+ca-nc  492.9    1.336        SOURCE1  1826    0.0012    0.0020
+ca-nd  492.9    1.336        SOURCE1  1826    0.0012    0.0020
+ca-ne  361.8    1.431        SOURCE1    52    0.0000    0.0000
+ca-nf  361.8    1.431        SOURCE1    52    0.0000    0.0000
+ca-nh  449.0    1.364        SOURCE1   137    0.0084    0.0085
+ca-no  322.6    1.468        SOURCE1   556    0.0000    0.0000
+ca-o   519.7    1.275        SOURCE3     2    0.0000    0.0000
+ca-oh  386.1    1.362        SOURCE1   551    0.0000    0.0000
+ca-os  372.4    1.373        SOURCE1  1092    0.0048    0.0071
+ca-p2  243.0    1.840        SOURCE0     1                    
+ca-p3  252.7    1.824        SOURCE1   145    0.0171    0.0187
+ca-p4  264.3    1.806        SOURCE0     1                    
+ca-p5  271.6    1.795        SOURCE1   571    0.0020    0.0028
+ca-pe  249.6    1.829        SOURCE3    10    0.0034    0.0042
+ca-pf  249.6    1.829        SOURCE3    10    0.0034    0.0042
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+cf-cf  562.4    1.338        SOURCE1   543    same as    ce-cf
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+cx-s6  283.7    1.731        SOURCE2     1    0.0000    0.0000
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+f -n1  375.7    1.410        SOURCE0     1                    
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+f -n4  526.8    1.308        SOURCE3     2    0.0000    0.0000
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+f -oh  305.4    1.444        SOURCE3     1    0.0000    0.0000
+f -os  326.2    1.423        SOURCE3     2    0.0000    0.0000
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+f -p3  254.5    1.578        SOURCE2     8    0.0093    0.0103
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+f -p5  253.8    1.579        SOURCE1    72    0.0000    0.0000
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+f -s4  282.4    1.591        SOURCE2     4    0.0065    0.0065
+f -s6  312.1    1.556        SOURCE2     5    0.0163    0.0220
+f -sh  240.4    1.649        SOURCE3     1    0.0000    0.0000
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+hn-n2  375.5    1.029        SOURCE3   108    0.0070    0.0096
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+hn-n4  369.0    1.033        SOURCE3   264    0.0054    0.0082
+hn-na  406.6    1.011        SOURCE3    46    0.0076    0.0107
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+i -n   278.3    2.098        SOURCE3     5    0.0153    0.0156
+i -n1  302.1    2.060        SOURCE0     1                    
+i -n2  182.6    2.304        SOURCE3     6    0.1010    0.1186
+i -n3  231.8    2.185        SOURCE3     3    0.0412    0.0437
+i -n4  246.6    2.155        SOURCE3     3    0.0158    0.0168
+i -na  260.5    2.129        SOURCE3     8    0.0838    0.1276
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+i -o   323.8    1.980        SOURCE0     1                    
+i -oh  247.9    2.101        SOURCE3     2    0.0000    0.0000
+i -os  233.6    2.129        SOURCE3     3    0.0138    0.0146
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+i -p3  123.6    2.566        SOURCE3     3    0.0015    0.0016
+i -p4  183.0    2.352        SOURCE3     4    0.2600    0.2600
+i -p5  117.3    2.596        SOURCE3     3    0.0135    0.0143
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+i -s4   82.8    2.870        SOURCE0     1                    
+i -s6   82.8    2.870        SOURCE3     1    0.0000    0.0000
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+i -ss  135.9    2.571        SOURCE3     3    0.0061    0.0065
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+n -nd  532.1    1.352        SOURCE3     4    same as    n -nc
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+n -o   646.6    1.264        SOURCE3     9    0.0336    0.0381
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+n -os  372.3    1.429        SOURCE3     7    0.0364    0.0528
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+n -p4  309.5    1.734        SOURCE3     1    0.0000    0.0000
+n -p5  327.0    1.713        SOURCE3     4    0.0084    0.0109
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+n -pd  304.8    1.740        SOURCE3     3    same as    n -pc
+n -s   247.5    1.767        SOURCE3     3    0.0011    0.0011
+n -s4  238.2    1.782        SOURCE3     4    0.0154    0.0214
+n -s6  270.8    1.732        SOURCE3     4    0.0177    0.0224
+n -sh  273.6    1.728        SOURCE3     4    0.0108    0.0128
+n -ss  281.6    1.717        SOURCE3     7    0.0120    0.0133
+n1-n1 1221.7    1.124        SOURCE1    19    0.0000    0.0000
+n1-n1 1365.7    1.100        SOURCE3  
+n1-n2  857.4    1.216        SOURCE1    19    0.0000    0.0000
+n1-n3  535.7    1.350        SOURCE0     1                    
+n1-n4  518.2    1.360        SOURCE0     1                    
+n1-na  535.7    1.350        SOURCE0     1                    
+n1-nc  857.4    1.216        SOURCE1    38    0.0000    0.0000
+n1-nd  857.4    1.216        SOURCE1    38    0.0000    0.0000
+n1-ne  751.9    1.252        SOURCE2     1    0.0000    0.0000
+n1-nf  751.9    1.252        SOURCE2     1    same as    n1-ne
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+n1-no  454.8    1.400        SOURCE0     1                    
+n1-o   617.5    1.277        SOURCE3     5    0.0340    0.0438
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+n1-os  550.5    1.310        SOURCE0     1                    
+n1-p2  358.8    1.678        SOURCE3     2    0.0282    0.0282
+n1-p3  376.7    1.660        SOURCE0     1                    
+n1-p4  353.0    1.680        SOURCE3
+n1-p5  482.7    1.571        SOURCE1   132    0.0000    0.0000
+n1-s   328.7    1.659        SOURCE3     6    0.0693    0.0789
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+n1-s4  336.8    1.650        SOURCE0     1                    
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+n2-nc  743.9    1.255        SOURCE1    13    same as    n2-nd
+n2-nd  743.9    1.255        SOURCE1    13    0.0000    0.0000
+n2-ne  685.5    1.278        SOURCE3    30    0.0224    0.0302
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+n2-o   789.9    1.209        SOURCE3    20    0.0284    0.0344
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+n2-p5  445.8    1.599        SOURCE1     7    0.0000    0.0000
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+n2-pf  527.9    1.540        SOURCE3    20    same as    n2-pe
+n2-s   458.1    1.541        SOURCE1    37    0.0000    0.0000
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+n2-s4  376.1    1.610        SOURCE0     1                    
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+n2-ss  331.4    1.656        SOURCE1    36    0.0000    0.0000
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+n3-na  426.7    1.420        SOURCE1    68    0.0000    0.0000
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+n3-o   564.0    1.303        SOURCE3     4    0.1197    0.1217
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+o -s4  448.7    1.497        SOURCE1    90    0.0000    0.0000
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+p2-s4  139.4    2.190        SOURCE0     1                    
+p2-s6  142.3    2.180        SOURCE0     1                    
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+p2-ss  226.6    1.966        SOURCE3    10    0.2189    0.2739
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+p3-p4  185.7    2.216        SOURCE3     3    0.0010    0.0011
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+px-sx  125.4    2.242        SOURCE3     3    0.0112    0.0119
+px-sy  123.7    2.249        SOURCE3     3    0.0256    0.0272
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+
+hw-ow-hw    100.      104.52    TIP3P water
+hw-hw-ow      0.      127.74    (found in crystallographic water with 3 bonds)
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+ca-cc-nc    70.2      115.05    SOURCE3    6   3.7100   4.3938 added by eajfpeters
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+os-cd-ss    62.0      132.01    SOURCE3    1  same as os-cc-ss
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+ha-cc-pd    53.6      121.76    SOURCE3   84  same as ha-cd-pc
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+c -cf-c2    65.8      120.42    SOURCE3   13  same as c -ce-c2
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+c3-sy-pe    71.8      106.03    SOURCE3    6   2.3845   2.6117
+c3-sy-pf    71.8      106.03    SOURCE3    6  same as c3-sy-pe
+c3-sy-px    71.7      103.62    SOURCE3    3   0.6673   0.7078
+c3-sy-py    73.5      103.39    SOURCE3    3   0.4302   0.4563
+c3-sy-sx    56.3      104.64    SOURCE3    3   4.3630   4.6276
+c3-sy-sy    57.4      100.78    SOURCE3    4   1.1633   1.1633
+ca-sy-ca    62.1       99.34    SOURCE3    3   4.9868   5.2893
+ca-sy-nh    65.2      100.83    SOURCE3    1   0.0000   0.0000
+ca-sy-o     65.8      108.73    SOURCE3   26   1.1018   1.2638
+ca-sy-oh    65.7      101.84    SOURCE3    4   0.9524   1.1069
+ca-sy-os    67.6       92.98    SOURCE3    1   0.0000   0.0000
+ce-sy-ce    61.1      102.78    SOURCE3    1   0.0000   0.0000
+cf-sy-cf    61.1      102.78    SOURCE3    1  same as ce-sy-ce
+ce-sy-o     66.4      107.25    SOURCE3   10   0.5364   0.5477
+cf-sy-o     66.4      107.25    SOURCE3   10  same as ce-sy-o 
+na-sy-na    67.7       98.04    SOURCE0    1                  
+nc-sy-nc    75.2       98.04    SOURCE0    2                  
+nd-sy-nd    75.2       98.04    SOURCE0    2                  
+ne-sy-ne    66.6       98.62    SOURCE3    1   0.0000   0.0000
+nf-sy-nf    66.6       98.62    SOURCE3    1  same as ne-sy-ne
+ne-sy-o     68.9      107.06    SOURCE3   14   2.1834   2.2705
+nf-sy-o     68.9      107.06    SOURCE3   14  same as ne-sy-o 
+nh-sy-o     70.9      108.46    SOURCE3    2   0.0000   0.0000
+o -sy-o     72.4      121.88    SOURCE3   46   0.7319   0.9495
+o -sy-oh    72.7      106.93    SOURCE3    8   0.6101   0.7424
+o -sy-os    70.6      107.62    SOURCE3    2   0.0000   0.0000
+o -sy-pe    75.4      106.90    SOURCE3   12   1.4233   1.4524
+o -sy-pf    75.4      106.90    SOURCE3   12  same as o -sy-pe
+o -sy-px    74.4      106.17    SOURCE3    6   0.6656   0.7059
+o -sy-py    76.5      106.67    SOURCE3   10   0.6188   0.6478
+o -sy-sx    58.6      106.33    SOURCE3   10   1.9984   2.0456
+o -sy-sy    58.8      106.19    SOURCE3   12   0.1653   0.1754
+py-sy-py    92.8      104.49    SOURCE3    1   0.0000   0.0000
+sx-sy-sx    56.7      101.99    SOURCE3    1   0.0000   0.0000
+sy-sy-sy    56.5      103.29    SOURCE3    1   0.0000   0.0000
+br-n1-c1    51.1      180.00    HF/6-31G*
+c1-n1-c1    64.9      179.92    HF/6-31G*
+c1-n1-c2    60.2      177.73    HF/6-31G*
+c1-n1-c3    59.9      180.00    HF/6-31G*
+c1-n1-ca    59.9      179.99    HF/6-31G*
+c1-n1-cl    50.1      179.95    HF/6-31G*
+c1-n1-f     55.9      179.96    HF/6-31G*
+c1-n1-hn    45.6      179.98    HF/6-31G*
+c1-n1-i     46.2      179.95    HF/6-31G*
+c1-n1-n1    66.9      180.00    HF/6-31G*
+c1-n1-n2    65.7      171.56    HF/6-31G*
+c1-n1-n3    60.7      175.59    HF/6-31G*
+c1-n1-n4    59.7      179.69    HF/6-31G*
+c1-n1-na    59.9      180.00    HF/6-31G*
+c1-n1-nh    60.9      176.35    HF/6-31G*
+c1-n1-o     62.6      179.95    HF/6-31G*
+c1-n1-oh    62.9      174.31    HF/6-31G*
+c1-n1-os    62.2      176.61    HF/6-31G*
+c1-n1-p2    83.5      172.83    HF/6-31G*
+c1-n1-p3    68.7      173.51    HF/6-31G*
+c1-n1-p4    68.7      173.64    HF/6-31G*
+c1-n1-p5    71.5      177.28    HF/6-31G*
+c1-n1-s     53.3      179.99    HF/6-31G*
+c1-n1-s2    60.3      178.11    HF/6-31G*
+c1-n1-s4    55.2      169.60    HF/6-31G*
+c1-n1-s6    61.8      175.92    HF/6-31G*
+c1-n1-sh    55.7      174.25    HF/6-31G*
+c1-n1-ss    55.4      176.06    HF/6-31G*
+c1-ng-ng    51.9      179.97    HF/6-31G*
+c2-c1-n1    63.1      180.00    HF/6-31G*
+c2-c2-n1    71.7      122.98    HF/6-31G*
+c2-n1-n1    61.6      180.00    HF/6-31G*
+c2-n2-n1    75.5      115.09    HF/6-31G*
+c2-na-n1    66.3      124.81    HF/6-31G*
+c3-n1-n1    58.8      180.00    HF/6-31G*
+c3-os-n1    66.3      113.50    HF/6-31G*
+c3-ss-n1    65.9       98.44    HF/6-31G*
+ca-ca-n1    63.4      118.50    HF/6-31G*
+ca-n1-n1    59.0      180.00    HF/6-31G*
+ca-nh-n1    69.4      117.13    HF/6-31G*
+cl-n1-n1    51.4      179.94    HF/6-31G*
+f -n1-n1    57.4      179.93    HF/6-31G*
+h1-c3-n1    60.3      107.31    HF/6-31G*
+hn-n1-n1    47.1      179.91    HF/6-31G*
+hn-n3-n1    52.0      110.17    HF/6-31G*
+hn-n4-n1    51.8      109.39    HF/6-31G*
+hn-nh-n1    52.3      110.57    HF/6-31G*
+ho-oh-n1    52.5      107.81    HF/6-31G*
+hp-p3-n1    31.3       92.98    HF/6-31G*
+hp-p4-n1    30.5       99.91    HF/6-31G*
+hp-p5-n1    31.1      101.32    HF/6-31G*
+hs-s4-n1    51.2       90.51    HF/6-31G*
+hs-s6-n1    54.7       97.27    HF/6-31G*
+hs-sh-n1    51.7       93.51    HF/6-31G*
+i -n1-n1    47.3      179.94    HF/6-31G*
+n1-n1-n1    69.0      179.97    HF/6-31G*
+n1-n1-n2    67.7      171.57    HF/6-31G*
+n1-n1-n3    62.5      175.09    HF/6-31G*
+n1-n1-n4    61.3      179.91    HF/6-31G*
+n1-n1-na    61.6      179.97    HF/6-31G*
+n1-n1-nh    62.7      176.00    HF/6-31G*
+n1-n1-o     64.4      179.94    HF/6-31G*
+n1-n1-oh    64.8      173.77    HF/6-31G*
+n1-n1-os    64.0      176.12    HF/6-31G*
+n1-n1-p2    69.4      174.71    HF/6-31G*
+n1-n1-p3    70.2      174.27    HF/6-31G*
+n1-n1-s     54.6      179.96    HF/6-31G*
+n1-n1-sh    57.0      175.07    HF/6-31G*
+n1-n1-ss    56.9      175.61    HF/6-31G*
+n1-p4-o     49.7      114.59    HF/6-31G*
+n1-p5-o     44.7      113.78    HF/6-31G*
+n1-s2-o     73.1      108.46    HF/6-31G*
+n1-s4-o     70.2      110.09    HF/6-31G*
+n1-s6-o     78.8      107.52    HF/6-31G*
+n1-c1-n1    70.2      180.00    HF/6-31G*
+n1-c2-n1    73.6      124.15    HF/6-31G*
+n1-c3-n1    80.0      105.07    HF/6-31G*
+n1-ca-n1    75.8      117.03    HF/6-31G*
+n1-n2-n1    80.8      112.00    HF/6-31G*
+n1-n3-n1    72.4      113.21    HF/6-31G*
+n1-n4-n1    72.7      110.67    HF/6-31G*
+n1-no-o     73.8      115.00    HF/6-31G* 
+n1-nh-n1    75.1      106.71    HF/6-31G*
+n1-os-n1    70.3      117.79    HF/6-31G*
+n1-ss-n1    73.1       96.96    HF/6-31G*
+n1-s4-n1    72.4       94.02    HF/6-31G*
+n1-s6-n1    83.7       95.52    HF/6-31G*
+n1-p2-n1    46.5       86.22    HF/6-31G*
+n1-p3-n1    45.9       90.44    HF/6-31G*
+n1-p4-n1    43.5      100.61    HF/6-31G*
+n1-p5-n1    45.8      101.55    HF/6-31G*
+o -c1-o     69.3      180.00    Guess
+c3-c1-c3    51.7      180.00    Guess
+ca-c1-ca    52.8      180.00    Guess
+f -c1-f     58.2      180.00    Guess
+cl-c1-cl    46.6      180.00    Guess
+br-c1-br    57.8      180.00    Guess
+i -c1-i     53.4      180.00    Guess
+s -c1-s     54.6      180.00    Guess
+s2-c1-s2    55.8      180.00    Guess
+s4-c1-s4    51.0      180.00    Guess
+s6-c1-s6    51.7      180.00    Guess
+sh-c1-sh    53.0      180.00    Guess
+ss-c1-ss    53.0      180.00    Guess
+oh-c1-oh    60.9      180.00    Guess
+os-c1-os    61.0      180.00    Guess
+p2-c1-p2    80.6      180.00    Guess
+p3-c1-p3    79.7      180.00    Guess
+p4-c1-p4    79.7      180.00    Guess
+p5-c1-p5    81.4      180.00    Guess
+n -c1-n     60.0      180.00    Guess
+n2-c1-n2    66.0      180.00    Guess
+n3-c1-n3    57.4      180.00    Guess
+n4-c1-n4    56.3      180.00    Guess
+nh-c1-nh    59.0      180.00    Guess
+no-c1-no    56.8      180.00    Guess
+na-c1-na    58.6      180.00    Guess
+na-c1-na    58.6      180.00    Guess
+na-c1-na    58.6      180.00    Guess
+
+X -c -c -X    4    1.200       180.000           2.000
+X -c -c1-X    2    0.000       180.000           2.000     
+X -c -cg-X    2    0.000       180.000           2.000      same as X-c-c1-X 
+X -c -ch-X    2    0.000       180.000           2.000     
+X -c -c2-X    4    8.700       180.000           2.000      intrpol.bsd.on C6H6
+X -c -cu-X    4    8.700       180.000           2.000      intrpol.bsd.on C6H6
+X -c -cv-X    4    8.700       180.000           2.000      intrpol.bsd.on C6H6
+X -c -ce-X    4    8.700       180.000           2.000      intrpol.bsd.on C6H6
+X -c -cf-X    4    8.700       180.000           2.000      intrpol.bsd.on C6H6
+X -c -c3-X    6    0.000       180.000           2.000      JCC, 7, (1986), 230
+X -c -cx-X    6    0.000       180.000           2.000      JCC, 7, (1986), 230
+X -c -cy-X    6    0.000       180.000           2.000      JCC, 7, (1986), 230
+X -c -ca-X    4   14.500       180.000           2.000      intrpol.bsd.on C6H6
+X -c -cc-X    4   11.500       180.000           2.000      statistic value 
+X -c -cd-X    4   11.500       180.000           2.000      statistic value 
+X -c -n -X    4   10.000       180.000           2.000      AA,NMA (no c-n3, c-n4, c-nh)
+X -c -n2-X    2    8.300       180.000           2.000      double bond, same as X-c2-n2-X
+X -c -nc-X    2    8.00        180.000           2.000      same as X-C-NC-X 
+X -c -nd-X    2    8.00        180.000           2.000      same as X-C-NC-X 
+X -c -ne-X    2    0.400       180.000           2.000      single bond
+X -c -nf-X    2    0.400       180.000           2.000      single bond
+X -c -na-X    4    5.800       180.000          -2.000
+X -c -na-X    4    1.400       180.000           4.000
+X -c -no-X    4    1.800       180.000           2.000      
+X -c -oh-X    2    4.600       180.000           2.000      Junmei et al, 1999
+X -c -os-X    2    5.400       180.000           2.000      Junmei et al, 1999
+X -c -pc-X    2    4.000       180.000           2.000      estimated   
+X -c -p2-X    2   13.300       180.000           2.000      double bond, same as X-c2-p2-X 
+X -c -pc-X    2    4.000       180.000           2.000      estimated   
+X -c -pd-X    2    4.000       180.000           2.000      estimated 
+X -c -pe-X    2    0.000       180.000           2.000      single bond
+X -c -pf-X    2    0.000       180.000           2.000      single bond
+X -c -p3-X    4    6.200       180.000           2.000
+X -c -p4-X    4    5.400       180.000           2.000
+X -c -px-X    4    5.400       180.000           2.000     
+X -c -p5-X    4    4.000         0.000           2.000
+X -c -py-X    4    4.000         0.000           2.000      
+X -c -sh-X    2    4.500       180.000           2.000
+X -c -ss-X    2    6.200       180.000           2.000
+X -c -s4-X    4    0.800       180.000           2.000
+X -c -sx-X    4    0.800       180.000           2.000     
+X -c -s6-X    6    3.000         0.000           2.000
+X -c -sy-X    6    3.000         0.000           2.000    
+X -c1-c1-X    1    0.000       180.000           2.000      for both triple and single bonds
+X -c1-cg-X    1    0.000       180.000           2.000      for both triple and single bonds
+X -c1-ch-X    1    0.000       180.000           2.000      for both triple and single bonds
+X -cg-cg-X    1    0.000       180.000           2.000      for both triple and single bonds
+X -ch-ch-X    1    0.000       180.000           2.000      for both triple and single bonds
+X -cg-ch-X    1    0.000       180.000           2.000      for both triple and single bonds
+X -c1-c2-X    2    0.000       180.000           2.000     
+X -c1-c3-X    3    0.000       180.000           2.000     
+X -c1-ca-X    2    0.000       180.000           2.000     
+X -c1-cb-X    2    0.000       180.000           2.000     
+X -c1-cc-X    2    0.000       180.000           2.000     
+X -c1-cd-X    2    0.000       180.000           2.000     
+X -c1-ce-X    2    0.000       180.000           2.000     
+X -c1-cf-X    2    0.000       180.000           2.000     
+X -c1-cu-X    2    0.000       180.000           2.000     
+X -c1-cv-X    2    0.000       180.000           2.000     
+X -c1-cx-X    3    0.000       180.000           2.000     
+X -c1-cy-X    3    0.000       180.000           2.000     
+X -c1-n -X    2    0.000       180.000           2.000     
+X -c1-n2-X    1    0.000       180.000           2.000     
+X -c1-n3-X    2    0.000       180.000           2.000     
+X -c1-n4-X    3    0.000       180.000           2.000     
+X -c1-na-X    2    0.000       180.000           2.000     
+X -c1-nb-X    2    0.000       180.000           2.000     
+X -c1-nc-X    2    0.000       180.000           2.000     
+X -c1-nd-X    2    0.000       180.000           2.000     
+X -c1-ne-X    2    0.000       180.000           2.000     
+X -c1-nf-X    2    0.000       180.000           2.000     
+X -c1-nh-X    2    0.000       180.000           2.000     
+X -c1-no-X    2    0.000       180.000           2.000     
+X -c1-oh-X    1    0.000       180.000           2.000     
+X -c1-os-X    1    0.000       180.000           2.000     
+X -c1-p2-X    1    0.000       180.000           2.000     
+X -c1-pb-X    1    0.000       180.000           2.000     
+X -c1-pc-X    1    0.000       180.000           2.000     
+X -c1-pd-X    1    0.000       180.000           2.000     
+X -c1-pe-X    1    0.000       180.000           2.000     
+X -c1-pf-X    1    0.000       180.000           2.000     
+X -c1-p3-X    2    0.000       180.000           2.000     
+X -c1-p4-X    2    0.000       180.000           2.000     
+X -c1-px-X    2    0.000       180.000           2.000     
+X -c1-p5-X    3    0.000       180.000           2.000     
+X -c1-py-X    3    0.000       180.000           2.000     
+X -c1-s2-X    1    0.000       180.000           2.000     
+X -c1-sh-X    1    0.000       180.000           2.000     
+X -c1-ss-X    1    0.000       180.000           2.000     
+X -c1-s4-X    2    0.000       180.000           2.000     
+X -c1-sx-X    2    0.000       180.000           2.000     
+X -c1-s6-X    3    0.000       180.000           2.000     
+X -c1-sy-X    3    0.000       180.000           2.000     
+X -c2-c2-X    4   26.600       180.000           2.000      c2=c2 double bond, intrpol.bsd.on C6H6
+X -c2-ce-X    4   26.600       180.000           2.000      c2=c2 double bond, intrpol.bsd.on C6H6
+X -c2-cf-X    4   26.600       180.000           2.000      c2=c2 double bond, intrpol.bsd.on C6H6
+X -ce-cf-X    4   26.600       180.000           2.000      c2=c2 double bond, intrpol.bsd.on C6H6
+X -ce-ce-X    4    4.000       180.000           2.000      c2-c2 single bond, parm99 
+X -cf-cf-X    4    4.000       180.000           2.000      c2-c2 single bond, parm99 
+X -cc-cd-X    4   16.000       180.000           2.000      statistic value of parm94
+X -cc-cc-X    4   16.000       180.000           2.000      statistic value of parm94
+X -cd-cd-X    4   16.000       180.000           2.000      statistic value of parm94
+X -c2-c3-X    6    0.000         0.000           2.000      JCC,7,(1986),230
+X -c2-ca-X    4   10.200       180.000           2.000      intrpol.bsd.on C6H6
+X -c2-n -X    4    2.600       180.000           2.000
+X -c2-n2-X    2    8.300       180.000           2.000      double bond, parm99
+X -c2-ne-X    2    8.300       180.000           2.000      double bond, parm99
+X -c2-nf-X    2    8.300       180.000           2.000      double bond, parm99
+X -ce-ne-X    2    1.600       180.000           2.000      single bond
+X -cf-nf-X    2    1.600       180.000           2.000      single bond
+X -c2-nc-X    2    9.500       180.000           2.000      statistic value from parm94
+X -c2-nd-X    2    9.500       180.000           2.000      statistic value from parm94
+X -cc-nd-X    2    9.500       180.000           2.000      statistic value from parm94
+X -cd-nc-X    2    9.500       180.000           2.000      statistiv value from parm94
+X -cc-nc-X    2    9.500       180.000           2.000      statistic value from parm94
+X -cd-nd-X    2    9.500       180.000           2.000      statistiv value from parm94
+X -c2-n3-X    4    1.200       180.000           2.000      intrpol.  
+X -c2-n4-X    6    0.000       180.000           3.000      intrpol. 
+X -c2-na-X    4    2.500       180.000           2.000
+X -cc-na-X    4    6.800       180.000           2.000      statistic value from parm94
+X -cd-na-X    4    6.800       180.000           2.000      statistic value from parm94
+X -c2-nh-X    4    2.700       180.000           2.000
+X -c2-no-X    4    3.000       180.000           2.000
+X -c2-oh-X    2    2.100       180.000           2.000      parm99 
+X -c2-os-X    2    2.100       180.000           2.000      parm99 
+X -c2-p2-X    2   13.300       180.000           2.000      double bond
+X -c2-pe-X    2   13.300       180.000           2.000      double bond
+X -c2-pf-X    2   13.300       180.000           2.000      double bond
+X -ce-pf-X    2   13.300       180.000           2.000      double bond
+X -ce-pe-X    2    1.900       180.000           2.000      single bond
+X -cf-pf-X    2    1.900       180.000           2.000      single bond
+X -c2-pc-X    2    9.500       180.000           2.000      estimated 
+X -c2-pd-X    2    9.500       180.000           2.000      estimated 
+X -cc-pc-X    2    9.500       180.000           2.000      estimated 
+X -cc-pd-X    2    9.500       180.000           2.000      estimated 
+X -cd-pc-X    2    9.500       180.000           2.000      estimated 
+X -cd-pd-X    2    9.500       180.000           2.000      estimated
+X -c2-p3-X    4    1.800       180.000           2.000
+X -c2-p4-X    4   26.600       180.000           2.000      c2=p4 double bond !!!  
+X -ce-p4-X    4   26.600       180.000           2.000      c2=p4 double bond !!!  
+X -cf-p4-X    4   26.600       180.000           2.000      c2=p4 double bond !!!  
+X -c2-px-X    4    1.300         0.000           2.000
+X -ce-px-X    4    1.300         0.000           2.000
+X -cf-px-X    4    1.300         0.000           2.000
+X -c2-p5-X    6   39.900       180.000           2.000      c2=p5 double bond !!!
+X -ce-p5-X    6   39.900       180.000           2.000      c2=p5 double bond !!!
+X -cf-p5-X    6   39.900       180.000           2.000      c2=p5 double bond !!!
+X -c2-py-X    6    8.600       180.000           2.000
+X -ce-py-X    6    8.600       180.000           2.000
+X -cf-py-X    6    8.600       180.000           2.000
+X -c2-sh-X    2    1.000       180.000           2.000
+X -c2-ss-X    2    2.200       180.000           2.000
+X -c2-s4-X    4   26.600       180.000           2.000      c2=s4 double bond  !!!
+X -ce-s4-X    4   26.600       180.000           2.000      c2=s4 double bond  !!!
+X -cf-s4-X    4   26.600       180.000           2.000      c2=s4 double bond  !!!
+X -c2-sx-X    4    2.400         0.000           2.000
+X -ce-sx-X    4    2.400         0.000           2.000
+X -cf-sx-X    4    2.400         0.000           2.000
+X -c2-s6-X    6   39.900       180.000           2.000      c2=s6 double bond  !!!
+X -ce-s6-X    6   39.900       180.000           2.000      c2=s6 double bond  !!!
+X -cf-s6-X    6   39.900       180.000           2.000      c2=s6 double bond  !!!
+X -c2-sy-X    6    7.600       180.000           2.000
+X -ce-sy-X    6    7.600       180.000           2.000
+X -cf-sy-X    6    7.600       180.000           2.000
+X -c3-c3-X    9    1.400         0.000           3.000      JCC,7,(1986),230
+X -cx-cx-X    9    1.400         0.000           3.000      same as X-c3-c3-X 
+X -cy-cy-X    9    1.400         0.000           3.000      same as X-c3-c3-X 
+X -c3-ca-X    6    0.000         0.000           2.000      JCC,7,(1986),230
+X -c3-n -X    6    0.000         0.000           2.000      JCC,7,(1986),230
+X -cx-n -X    6    0.000         0.000           2.000      same as X-c3-n-X 
+X -cy-n -X    6    0.000         0.000           2.000      same as X-c3-n-X
+X -c3-n2-X    6    0.000         0.000           3.000      JCC,7,(1986),230
+X -c3-ne-X    6    0.000         0.000           3.000      JCC,7,(1986),230
+X -c3-nf-X    6    0.000         0.000           3.000      JCC,7,(1986),230
+X -c3-n3-X    6    1.800         0.000           3.000      Junmei et al, 1999 
+X -c3-n4-X    9    1.400         0.000           3.000      JCC,7,(1986),230
+X -c3-na-X    6    0.000         0.000           2.000      JCC,7,(1986),230
+X -c3-nh-X    6    0.000         0.000           2.000      JCC,7,(1986),230
+X -c3-no-X    6    0.000         0.000           2.000      JCC,7,(1986),230
+X -c3-oh-X    3    0.500         0.000           3.000      JCC,7,(1986),230
+X -c3-os-X    3    1.150         0.000           3.000      JCC,7,(1986),230
+X -c3-p2-X    3    0.800       180.000           2.000
+X -c3-pe-X    3    0.800       180.000           2.000
+X -c3-pf-X    3    0.800       180.000           2.000
+X -c3-p3-X    6    0.800         0.000           3.000
+X -c3-p4-X    6    0.800         0.000           3.000
+X -c3-px-X    6    0.800         0.000           3.000
+X -c3-p5-X    9    0.200         0.000           3.000
+X -c3-py-X    9    0.200         0.000           3.000
+X -c3-sh-X    3    0.750         0.000           3.000      JCC,7,(1986),230
+X -c3-ss-X    3    1.000         0.000           3.000      JCC,7,(1986),230
+X -c3-s4-X    6    1.200         0.000           3.000      
+X -c3-sx-X    6    1.200         0.000           3.000      
+X -c3-s6-X    9    1.300         0.000           3.000     
+X -c3-sy-X    9    1.300         0.000           3.000     
+X -c3-cc-X    6    0.000         0.000           3.000      same as X-c3-ca-X
+X -c3-cd-X    6    0.000         0.000           3.000      same as X-c3-ca-X
+X -ca-ca-X    4   14.500       180.000           2.000      intrpol.bsd.on C6H6
+X -ca-cc-X    4   14.500       180.000           2.000      added by EAJF Peters
+X -ca-cp-X    4   14.500       180.000           2.000      intrpol.bsd.on C6H6
+X -ca-cq-X    4   14.500       180.000           2.000      intrpol.bsd.on C6H6
+X -cp-cp-X    4    4.000       180.000           2.000      estimated, intrpol. 
+X -cq-cq-X    4    4.000       180.000           2.000      estimated, intrpol. 
+X -ca-n -X    4    1.800       180.000           2.000
+X -ca-n2-X    2    0.000       180.000           3.000
+X -ca-ne-X    2    0.000       180.000           3.000
+X -ca-nf-X    2    0.000       180.000           3.000
+X -ca-n4-X    4    7.000         0.000           2.000
+X -ca-na-X    4    1.200       180.000           2.000
+X -ca-nb-X    2    9.60        180.0             2.000      same as X-CA-NC-X
+X -ca-nc-X    2    9.60        180.0             2.000      same as X-CA-NC-X
+X -ca-nd-X    2    9.60        180.0             2.000      same as X-CA-NC-X
+X -ca-nh-X    4    4.200       180.000           2.000
+X -cc-nh-X    4    4.200       180.000           2.000      same as X-ca-nh-X
+X -cd-nh-X    4    4.200       180.000           2.000      same as X-ca-nh-X
+X -ca-no-X    4    2.400       180.000           2.000
+X -ca-oh-X    2    1.800       180.000           2.000      Junmei et al, 99
+X -ca-os-X    2    1.800       180.000           2.000      same as X-ca-oh-X 
+X -ca-p2-X    2    1.200       180.000           2.000
+X -ca-pe-X    2    1.200       180.000           2.000      same as X-ca-p2-X
+X -ca-pf-X    2    1.200       180.000           2.000      same as X-ca-p2-X
+X -ca-pc-X    2    9.600       180.000           2.000      estimated, intrpol 
+X -ca-pd-X    2    9.600       180.000           2.000      estimated, intrpol 
+X -ca-p3-X    4    0.000       180.000           2.000
+X -ca-p4-X    4    2.100       180.000           2.000
+X -ca-px-X    4    2.100       180.000           2.000      estimated, same as X-ca-p4-X
+X -ca-p5-X    6    8.800       180.000           2.000
+X -ca-py-X    6    8.800       180.000           2.000      estimated, same as X-ca-p5-X
+X -ca-sh-X    2    0.000       180.000           2.000
+X -ca-ss-X    2    0.800       180.000           2.000
+X -ca-s4-X    4    1.200         0.000           2.000
+X -ca-sx-X    4    1.200         0.000           2.000      estimated, same as X-ca-s4-X
+X -ca-s6-X    6    7.800       180.000           2.000
+X -ca-sy-X    6    7.800       180.000           2.000      estimated, same as X-ca-s6-X
+X -n -cc-X    4    6.600       180.000           2.000      statistic value from parm94
+X -n -cd-X    4    6.600       180.000           2.000      statistic value from parm94
+X -n -n -X    4    4.600         0.000           2.000
+X -n -n2-X    2    0.800         0.000           2.000
+X -n -ne-X    2    0.800         0.000           2.000
+X -n -nf-X    2    0.800         0.000           2.000
+X -n -n3-X    4    4.300         0.000           2.000
+X -n -n4-X    4    3.800         0.000           2.000
+X -n -na-X    4    2.800         0.000           2.000
+X -n -nc-X    2    9.600       180.000           2.000      estimated, intrpol.
+X -n -nd-X    2    9.600       180.000           2.000      estimated, intrpol.
+X -n -nh-X    4    4.400         0.000           2.000
+X -n -no-X    4    5.500       180.000           2.000
+X -n -oh-X    2    3.000         0.000           2.000
+X -n -os-X    2    2.200         0.000           2.000
+X -n -p2-X    2    2.000       180.000           2.000
+X -n -pe-X    2    2.000       180.000           2.000
+X -n -pf-X    2    9.600       180.000           2.000      estimated, intrpol.
+X -n -pc-X    2    9.600       180.000           2.000      estimated, intrpol.
+X -n -pd-X    2    2.000       180.000           2.000
+X -n -p3-X    4    9.000         0.000           2.000
+X -n -p4-X    4    1.300         0.000           2.000
+X -n -px-X    4    1.300         0.000           2.000
+X -n -p5-X    6   13.200       180.000           2.000
+X -n -py-X    6   13.200       180.000           2.000
+X -n -sh-X    2    2.200         0.000           2.000
+X -n -ss-X    2    3.000         0.000           2.000
+X -n -s4-X    4    6.000         0.000           3.000
+X -n -sx-X    4    6.000         0.000           3.000
+X -n -s6-X    6    6.600       180.000           2.000
+X -n -sy-X    6    6.600       180.000           2.000
+X -n1-c2-X    2    0.000       180.000           2.000     
+X -n1-c3-X    3    0.000       180.000           2.000     
+X -n1-ca-X    2    0.000       180.000           2.000     
+X -n1-cb-X    2    0.000       180.000           2.000     
+X -n1-cc-X    2    0.000       180.000           2.000     
+X -n1-cd-X    2    0.000       180.000           2.000     
+X -n1-ce-X    2    0.000       180.000           2.000     
+X -n1-cf-X    2    0.000       180.000           2.000     
+X -n1-cu-X    2    0.000       180.000           2.000     
+X -n1-cv-X    2    0.000       180.000           2.000     
+X -n1-cx-X    3    0.000       180.000           2.000     
+X -n1-cy-X    3    0.000       180.000           2.000     
+X -n1-n -X    2    0.000       180.000           2.000     
+X -n1-n1-X    1    0.000       180.000           2.000     
+X -n1-n2-X    1    0.000       180.000           2.000     
+X -n1-n3-X    2    0.000       180.000           2.000     
+X -n1-n4-X    3    0.000       180.000           2.000     
+X -n1-na-X    2    0.000       180.000           2.000     
+X -n1-nb-X    2    0.000       180.000           2.000     
+X -n1-nc-X    2    0.000       180.000           2.000     
+X -n1-nd-X    2    0.000       180.000           2.000     
+X -n1-ne-X    2    0.000       180.000           2.000     
+X -n1-nf-X    2    0.000       180.000           2.000     
+X -n1-nh-X    2    0.000       180.000           2.000     
+X -n1-no-X    2    0.000       180.000           2.000     
+X -n1-oh-X    1    0.000       180.000           2.000     
+X -n1-os-X    1    0.000       180.000           2.000     
+X -n1-p2-X    1    0.000       180.000           2.000     
+X -n1-pb-X    1    0.000       180.000           2.000     
+X -n1-pc-X    1    0.000       180.000           2.000     
+X -n1-pd-X    1    0.000       180.000           2.000     
+X -n1-pe-X    1    0.000       180.000           2.000     
+X -n1-pf-X    1    0.000       180.000           2.000     
+X -n1-p3-X    2    0.000       180.000           2.000     
+X -n1-p4-X    2    0.000       180.000           2.000     
+X -n1-px-X    2    0.000       180.000           2.000     
+X -n1-p5-X    3    0.000       180.000           2.000     
+X -n1-py-X    3    0.000       180.000           2.000     
+X -n1-s2-X    1    0.000       180.000           2.000     
+X -n1-sh-X    1    0.000       180.000           2.000     
+X -n1-ss-X    1    0.000       180.000           2.000     
+X -n1-s4-X    2    0.000       180.000           2.000     
+X -n1-sx-X    2    0.000       180.000           2.000     
+X -n1-s6-X    3    0.000       180.000           2.000     
+X -n1-sy-X    3    0.000       180.000           2.000     
+X -n2-n2-X    1    3.000       180.000          -2.000      double bond
+X -n2-n2-X    1    2.800         0.000           1.000      double bond
+X -n2-ne-X    1    3.000       180.000          -2.000      double bond
+X -n2-ne-X    1    2.800         0.000           1.000      double bond
+X -n2-nf-X    1    3.000       180.000          -2.000      double bond
+X -n2-nf-X    1    2.800         0.000           1.000      double bond
+X -ne-nf-X    1    3.000       180.000          -2.000      double bond
+X -ne-nf-X    1    2.800         0.000           1.000      double bond
+X -ne-ne-X    1    1.200       180.000           2.000      single bond, intrpol
+X -nf-nf-X    1    1.200       180.000           2.000      single bond, intrpol
+X -nc-nc-X    1    4.000       180.000           2.000      estimated, intrpol 
+X -nd-nd-X    1    4.000       180.000           2.000      estimated, intrpol  
+X -nc-nd-X    1    4.000       180.000           2.000      estimated, intrpol 
+X -n2-nc-X    1    3.000       180.000          -2.000      same as X-n2-n2-X
+X -n2-nc-X    1    2.800         0.000           1.000      
+X -n2-nd-X    1    3.000       180.000          -2.000      same as X-n2-n2-X 
+X -n2-nd-X    1    2.800         0.000           1.000      
+X -n2-n3-X    2   12.200       180.000           2.000
+X -ne-n3-X    2   12.200       180.000           2.000
+X -nf-n3-X    2   12.200       180.000           2.000
+X -n2-n4-X    3   24.000       180.000           2.000
+X -ne-n4-X    3   24.000       180.000           2.000
+X -nf-n4-X    3   24.000       180.000           2.000
+X -n2-na-X    2    3.400       180.000           2.000
+X -ne-na-X    2    3.400       180.000           2.000
+X -nf-na-X    2    3.400       180.000           2.000
+X -na-nc-X    2    9.600       180.000           2.000      estimated, intrpol.
+X -na-nd-X    2    9.600       180.000           2.000      estimated, intrpol.
+X -n2-nh-X    2    5.600       180.000           2.000
+X -ne-nh-X    2    5.600       180.000           2.000
+X -nf-nh-X    2    5.600       180.000           2.000
+X -n2-no-X    2    1.500       180.000           2.000
+X -ne-no-X    2    1.500       180.000           2.000
+X -nf-no-X    2    1.500       180.000           2.000
+X -n2-oh-X    1    3.200       180.000           2.000
+X -ne-oh-X    1    3.200       180.000           2.000
+X -nf-oh-X    1    3.200       180.000           2.000
+X -n2-os-X    1    3.000       180.000           2.000
+X -ne-os-X    1    3.000       180.000           2.000
+X -nf-os-X    1    3.000       180.000           2.000
+X -nc-os-X    1    4.800       180.000           2.000      estimated, intrpol.
+X -nc-ss-X    1    4.800       180.000           2.000      estimated, intrpol.
+X -n2-p2-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -n2-pe-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -n2-pf-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -ne-pf-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -n2-pc-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -n2-pd-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -nc-p2-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -nd-p2-X    1    5.400       180.000           2.000      estimated, intrpol.
+X -nc-pc-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -nd-pd-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -nd-pc-X    1    6.600       180.000           2.000      estimated, intrpol. 
+X -nc-pd-X    1    6.600       180.000           2.000      estimated, intrpol. 
+X -ne-pe-X    1    0.600         0.000           1.000      single bond
+X -nf-pf-X    1    0.600         0.000           1.000      single bond
+X -n2-p3-X    2    4.200       180.000           2.000
+X -n2-p4-X    2   13.300       180.000           2.000      estimated  !!!
+X -ne-p4-X    2   13.300       180.000           2.000      estimated  !!!
+X -nf-p4-X    2   13.300       180.000           2.000      estimated  !!!
+X -n2-p5-X    3   20.000       180.000           2.000      estimated  !!!
+X -ne-p5-X    3    3.000       180.000           3.000
+X -nf-p5-X    3    3.000       180.000           3.000
+X -ne-px-X    3    3.000       180.000           3.000
+X -nf-px-X    3    3.000       180.000           3.000
+X -n2-sh-X    1    2.100       180.000           2.000
+X -ne-sh-X    1    2.100       180.000           2.000
+X -nf-sh-X    1    2.100       180.000           2.000
+X -n2-ss-X    1    2.800       180.000          -2.000
+X -n2-ss-X    1    1.300       180.000           1.000
+X -ne-ss-X    1    2.800       180.000          -2.000
+X -ne-ss-X    1    1.300       180.000           1.000
+X -nf-ss-X    1    2.800       180.000          -2.000
+X -nf-ss-X    1    1.300       180.000           1.000
+X -n2-s4-X    2   13.300       180.000           2.000      estimated !!!
+X -ne-sx-X    2    3.000       180.000           3.000
+X -nf-sx-X    2    3.000       180.000           3.000
+X -n2-s6-X    3   20.000       180.000           2.000      estimated  !!!
+X -ne-sy-X    3    1.500       180.000          -3.000
+X -ne-sy-X    3   20.400       180.000           1.000
+X -nf-sy-X    3    1.500       180.000          -3.000
+X -nf-sy-X    3   20.400       180.000           1.000
+X -n3-n3-X    4    9.000         0.000           2.000
+X -n3-n4-X    6    1.500         0.000           3.000
+X -n3-na-X    4    6.400         0.000           2.000
+X -n3-nh-X    4    7.600         0.000           2.000
+X -n3-no-X    4   16.000       180.000           2.000
+X -n3-oh-X    1    2.200         0.000           2.000
+X -n3-os-X    1    1.800         0.000           2.000
+X -n3-p2-X    2    6.400       180.000           2.000
+X -n3-pe-X    2    6.400       180.000           2.000
+X -n3-pf-X    2    6.400       180.000           2.000
+X -n3-p3-X    4    9.400         0.000           2.000
+X -n3-p4-X    4    8.400       180.000           2.000
+X -n3-px-X    4    8.400       180.000           2.000
+X -n3-p5-X    6   18.000       180.000           2.000
+X -n3-py-X    6   18.000       180.000           2.000
+X -n3-sh-X    1    3.100         0.000           2.000
+X -n3-ss-X    1    2.600         0.000           2.000
+X -n3-s4-X    4   15.000         0.000           2.000
+X -n3-sx-X    4   15.000         0.000           2.000
+X -n3-s6-X    6   18.800         0.000           2.000
+X -n3-sy-X    6   18.800         0.000           2.000
+X -n4-n4-X    9    1.700         0.000           3.000
+X -n4-na-X    6    1.400         0.000           3.000
+X -n4-nh-X    6    1.100         0.000           3.000
+X -n4-no-X    6    0.500       180.000           3.000
+X -n4-oh-X    3    1.000         0.000           3.000
+X -n4-os-X    3    1.700         0.000           3.000
+X -n4-p2-X    3    0.500       180.000           3.000
+X -n4-pe-X    3    0.500       180.000           3.000
+X -n4-pf-X    3    0.500       180.000           3.000
+X -n4-p3-X    6    0.900         0.000           3.000
+X -n4-p4-X    4    0.200         0.000           3.000
+X -n4-px-X    4    0.200         0.000           3.000
+X -n4-p5-X    9    0.800         0.000           3.000
+X -n4-py-X    9    0.800         0.000           3.000
+X -n4-sh-X    3    2.000         0.000           3.000
+X -n4-ss-X    3    1.000         0.000           3.000
+X -n4-s4-X    6    1.700         0.000           3.000
+X -n4-sx-X    6    1.700         0.000           3.000
+X -n4-s6-X    9    1.200         0.000           3.000
+X -n4-sy-X    9    1.200         0.000           3.000
+X -na-na-X    4    3.600         0.000           2.000
+X -na-nh-X    4    4.800         0.000           2.000
+X -na-no-X    4   24.000       180.000           2.000
+X -na-oh-X    2    2.000         0.000           2.000
+X -na-os-X    2    1.300         0.000           2.000
+X -na-p2-X    1    1.000       180.000           2.000
+X -na-pe-X    1    1.000       180.000           2.000
+X -na-pf-X    1    1.000       180.000           2.000
+X -na-p3-X    4    5.800         0.000           2.000
+X -na-p4-X    4    4.400         0.000           3.000
+X -na-px-X    4    4.400         0.000           3.000
+X -na-p5-X    6    5.000       180.000           2.000
+X -na-py-X    6    5.000       180.000           2.000
+X -na-sh-X    2    3.600         0.000           2.000
+X -na-ss-X    2   15.600         0.000           2.000
+X -na-s4-X    4    4.200         0.000           2.000
+X -na-sx-X    4    4.200         0.000           2.000
+X -na-s6-X    6   22.000       180.000           2.000
+X -na-sy-X    6   22.000       180.000           2.000
+X -nh-nh-X    4    7.200       180.000           3.000
+X -nh-no-X    4   10.200       180.000           2.000
+X -nh-oh-X    2    3.000         0.000           2.000
+X -nh-os-X    2    3.000         0.000           1.000
+X -nh-p2-X    2    2.800       180.000           2.000
+X -nh-pe-X    2    2.800       180.000           2.000
+X -nh-pf-X    2    2.800       180.000           2.000
+X -nh-p3-X    4    9.400         0.000           2.000
+X -nh-p4-X    4    4.700         0.000           3.000
+X -nh-px-X    4    4.700         0.000           3.000
+X -nh-p5-X    6    4.800         0.000           2.000
+X -nh-py-X    6    4.800         0.000           2.000
+X -nh-sh-X    2    3.200         0.000           2.000
+X -nh-ss-X    2    4.200         0.000           2.000
+X -nh-s4-X    4    3.000         0.000          -2.000
+X -nh-s4-X    4    0.400       180.000           3.000
+X -nh-sx-X    4    3.000         0.000          -2.000
+X -nh-sx-X    4    0.400       180.000           3.000
+X -nh-s6-X    6    0.600       180.000           2.000
+X -nh-sy-X    6    0.600       180.000           2.000
+X -no-no-X    4    1.600       180.000          -4.000
+X -no-no-X    4    7.200       180.000           2.000
+X -no-oh-X    2    7.800       180.000           2.000
+X -no-os-X    2    6.000       180.000           2.000
+X -no-p2-X    1    0.300       180.000           2.000
+X -no-pe-X    1    0.300       180.000           2.000
+X -no-pf-X    1    0.300       180.000           2.000
+X -no-p3-X    4    7.600       180.000           2.000
+X -no-p4-X    4    2.300       180.000           2.000
+X -no-px-X    4    2.300       180.000           2.000
+X -no-p5-X    6   14.400         0.000          -2.000
+X -no-p5-X    6    2.400         0.000           3.000
+X -no-py-X    6   14.400         0.000          -2.000
+X -no-py-X    6    2.400         0.000           3.000
+X -no-sh-X    2    4.600       180.000           2.000
+X -no-ss-X    2    5.400       180.000           2.000
+X -no-s4-X    4   10.400       180.000           2.000
+X -no-sx-X    4   10.400       180.000           2.000
+X -no-s6-X    6    2.000         0.000           2.000
+X -no-sy-X    6    2.000         0.000           2.000
+X -oh-oh-X    1    1.600         0.000           2.000
+X -oh-os-X    1    1.600         0.000           2.000
+X -oh-p2-X    1    1.500       180.000           2.000
+X -oh-pe-X    1    1.500       180.000           2.000
+X -oh-pf-X    1    1.500       180.000           2.000
+X -oh-p3-X    2    0.800       180.000           3.000
+X -oh-p4-X    2    1.400         0.000           1.000
+X -oh-px-X    2    1.400         0.000           1.000
+X -oh-p5-X    3    1.600         0.000           3.000
+X -oh-py-X    3    1.600         0.000           3.000
+X -oh-sh-X    1    2.400         0.000           2.000
+X -oh-ss-X    1    2.400         0.000           2.000
+X -oh-s4-X    2   10.000         0.000           1.000
+X -oh-sx-X    2   10.000         0.000           1.000
+X -oh-s6-X    3   28.500       180.000           1.000
+X -oh-sy-X    3   28.500       180.000           1.000
+X -os-os-X    1    1.000         0.000           1.000
+X -os-ss-X    1    2.200         0.000           2.000
+X -os-sh-X    1    1.800         0.000           2.000
+X -os-s4-X    2    3.300         0.000           3.000
+X -os-sx-X    2    3.300         0.000           3.000
+X -os-s6-X    3    3.600       180.000           2.000
+X -os-sy-X    3    3.600       180.000           2.000
+X -os-p2-X    1    3.000       180.000          -2.000
+X -os-p2-X    1    2.000       180.000           1.000
+X -os-pe-X    1    3.000       180.000          -2.000
+X -os-pe-X    1    2.000       180.000           1.000
+X -os-pf-X    1    3.000       180.000          -2.000
+X -os-pf-X    1    2.000       180.000           1.000
+X -os-p3-X    2    4.400         0.000           2.000
+X -os-p4-X    2    2.100       180.000           2.000
+X -os-px-X    2    2.100       180.000           2.000
+X -os-p5-X    3    2.400         0.000           2.000
+X -os-py-X    3    2.400         0.000           2.000
+X -p2-p2-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -p2-pe-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -p2-pf-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -p2-pc-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -p2-pd-X    1    6.600       180.000           2.000      estimated, intrpol.
+X -pe-pe-X    1    1.200       180.000           2.000      single bond
+X -pf-pf-X    1    1.200       180.000           2.000      single bond
+X -pc-pc-X    1    7.200       180.000           2.000      estimated, intrpol. 
+X -pd-pd-X    1    7.200       180.000           2.000      estimated, intrpol.  
+X -pc-pd-X    1    7.200       180.000           2.000      estimated, intrpol. 
+X -p2-p3-X    2    2.400         0.000           1.000
+X -pe-p3-X    2    2.400         0.000           1.000
+X -pf-p3-X    2    2.400         0.000           1.000
+X -p2-p4-X    2   13.300       180.000           2.000      estimated  !!!
+X -pe-px-X    2    4.900         0.000           2.000
+X -pf-px-X    2    4.900         0.000           2.000
+X -p2-p5-X    3   20.000       180.000           2.000      estimated  !!!
+X -pe-py-X    3    5.700         0.000           1.000
+X -pf-py-X    3    5.700         0.000           1.000
+X -p2-sh-X    1    1.400       180.000           2.000
+X -pe-sh-X    1    1.400       180.000           2.000
+X -pf-sh-X    1    1.400       180.000           2.000
+X -p2-ss-X    1    1.400       180.000           2.000
+X -pe-ss-X    1    1.400       180.000           2.000
+X -pf-ss-X    1    1.400       180.000           2.000
+X -p2-s4-X    2   13.300       180.000           2.000       estimated !!!
+X -pe-sx-X    2    3.000         0.000           2.000
+X -pf-sx-X    2    3.000         0.000           2.000
+X -p2-s6-X    3   20.000       180.000           2.000       estimated !!!
+X -pe-sy-X    3    1.200       180.000           3.000
+X -pf-sy-X    3    1.200       180.000           3.000
+X -p3-p3-X    4    2.000         0.000           3.000
+X -p3-p4-X    4    3.600         0.000           1.000
+X -p3-px-X    4    3.600         0.000           1.000
+X -p3-p5-X    6   11.000       180.000           2.000
+X -p3-py-X    6   11.000       180.000           2.000
+X -p3-sh-X    2    9.200         0.000           2.000
+X -p3-ss-X    2    2.300         0.000           3.000
+X -p3-ss-X    2    2.300         0.000           3.000
+X -p3-s4-X    4   15.400         0.000           2.000
+X -p3-sx-X    4   15.400         0.000           2.000
+X -p3-s6-X    6    1.600         0.000           3.000
+X -p3-sy-X    6    1.600         0.000           3.000
+X -p4-p4-X    4   26.600       180.000           2.000      estimated   !!!
+X -px-px-X    4    5.800       180.000           2.000
+X -p4-p5-X    6   39.900       180.000           2.000      estimated   !!!
+X -px-py-X    6    1.900       180.000           2.000
+X -p4-s4-X    4   26.600       180.000           2.000      estimated   !!!
+X -px-sx-X    4    3.400         0.000           1.000
+X -p4-s6-X    6   39.900       180.000           2.000      estimated   !!!
+X -px-sy-X    6    0.700         0.000           3.000
+X -p4-sh-X    2    0.500       180.000           1.000
+X -px-sh-X    2    0.500       180.000           1.000
+X -p4-ss-X    2    1.200       180.000           2.000
+X -px-ss-X    2    1.200       180.000           2.000
+X -p5-p5-X    9   60.000       180.000           2.000      estimated   !!!
+X -py-py-X    9    5.400         0.000           2.000
+X -p5-sh-X    3    0.900         0.000           3.000
+X -py-sh-X    3    0.900         0.000           3.000
+X -p5-ss-X    3   11.400       180.000           2.000
+X -py-ss-X    3   11.400       180.000           2.000
+X -p5-s4-X    6   40.000       180.000           2.000      estimated  !!!
+X -py-sx-X    6    1.600         0.000           3.000
+X -p5-s6-X    9   60.000       180.000           2.000      estimated  !!!
+X -py-sy-X    9    2.500         0.000           3.000
+X -sh-sh-X    1    5.600         0.000           3.000
+X -sh-ss-X    1    5.300         0.000           3.000
+X -sh-s4-X    2    1.400         0.000           3.000
+X -sh-sx-X    2    1.400         0.000           3.000
+X -sh-s6-X    3   14.000       180.000           2.000
+X -sh-sy-X    3   14.000       180.000           2.000
+X -ss-ss-X    1    0.000         0.000           3.000
+X -ss-s4-X    2    0.600         0.000           3.000
+X -ss-sx-X    2    0.600         0.000           3.000
+X -ss-s6-X    3    9.200       180.000           2.000
+X -ss-sy-X    3    9.200       180.000           2.000
+X -s4-s4-X    4   26.600       180.000           2.000       estimated !!!
+X -sx-sx-X    4    2.500         0.000           3.000
+X -s4-s6-X    6   40.000       180.000           2.000       estimated !!!
+X -sx-sy-X    6   26.000       180.000           2.000
+X -s6-s6-X    9   60.000       180.000           2.000       estimated !!!
+X -sy-sy-X    9    1.400       180.000           2.000
+c3-c -sh-hs   1    2.250       180.000          -2.000
+c3-c -sh-hs   1    1.300       180.000           1.000
+c2-c2-ss-c3   1    1.100       180.000          -2.000
+c2-c2-ss-c3   1    0.700       180.000           3.000
+c2-c2-n -c    1    0.650       180.000          -2.000
+c2-c2-n -c    1    1.200       180.000           1.000
+c -n -p2-c2   1    1.000       180.000          -2.000
+c -n -p2-c2   1    1.900       180.000           1.000
+n -c3-c -n    1    1.700       180.000          -1.
+n -c3-c -n    1    2.000       180.000           2.
+c -n -c3-c    1    0.850       180.000          -2.
+c -n -c3-c    1    0.800         0.000           1.
+c3-c3-n -c    1    0.50        180.0            -4.         phi,psi,parm94
+c3-c3-n -c    1    0.15        180.0            -3.         phi,psi,parm94
+c3-c3-n -c    1    0.53          0.0             1.         phi,psi,parm94
+c3-c3-c -n    1    0.100         0.0            -4.         phi,psi,parm94
+c3-c3-c -n    1    0.07          0.0             2.         phi,psi,parm94
+c2-ne-p5-o    1    2.30          0.0             1.         phi,psi,parm94
+c2-nf-p5-o    1    2.30          0.0             1.         phi,psi,parm94
+ce-ne-p5-o    1    2.30          0.0             1.         phi,psi,parm94
+ce-nf-p5-o    1    2.30          0.0             1.         phi,psi,parm94
+cf-ne-p5-o    1    2.30          0.0             1.         phi,psi,parm94
+cf-nf-p5-o    1    2.30          0.0             1.         phi,psi,parm94
+hn-n -c -o    1    2.50        180.0            -2.         JCC,7,(1986),230
+hn-n -c -o    1    2.00          0.0             1.         J.C.cistrans-NMA DE
+c3-ss-ss-c3   1    3.50          0.0            -2.         JCC,7,(1986),230
+c3-ss-ss-c3   1    0.60          0.0             3.         JCC,7,(1986),230
+c3-n3-nh-ca   1    1.90          0.0            -2.
+c3-n3-nh-ca   1    1.90          0.0             3.
+c3-n3-p5-o    1    3.00        180.0            -2.
+c3-n3-p5-o    1    2.30          0.0             3.
+ca-nh-oh-ho   1    1.20          0.0            -1.
+ca-nh-oh-ho   2    3.00          0.0             2.
+oh-p5-os-c3   1    0.25          0.0            -3.         JCC,7,(1986),230
+oh-p5-os-c3   1    1.20          0.0             2.         gg&gt ene.631g*/mp2
+os-p5-os-c3   1    0.25          0.0            -3.         JCC,7,(1986),230
+os-p5-os-c3   1    1.20          0.0             2.         gg&gt ene.631g*/mp2
+h1-c3-c -o    1    0.80          0.0            -1.         Junmei et al, 1999
+h1-c3-c -o    1    0.08        180.0             3.         Junmei et al, 1999
+hc-c3-c -o    1    0.80          0.0            -1.         Junmei et al, 1999
+hc-c3-c -o    1    0.08        180.0             3.         Junmei et al, 1999
+hc-c3-c3-hc   1    0.15          0.0             3.         Junmei et al, 1999
+hc-c3-c3-c3   1    0.16          0.0             3.         Junmei et al, 1999
+hc-c3-c2-c2   1    0.38        180.0            -3.         Junmei et al, 1999
+hc-c3-c2-c2   1    1.15          0.0             1.         Junmei et al, 1999
+ho-oh-c3-c3   1    0.16          0.0            -3.         Junmei et al, 1999
+ho-oh-c3-c3   1    0.25          0.0             1.         Junmei et al, 1999
+ho-oh-c -o    1    2.30        180.0            -2.         Junmei et al, 1999
+ho-oh-c -o    1    1.90          0.0             1.         Junmei et al, 1999
+c2-c2-c -o    1    2.175       180.0            -2.         Junmei et al, 1999
+c2-c2-c -o    1    0.30          0.0             3.         Junmei et al, 1999
+c3-c2-c2-c3   1    6.65        180.0            -2.         Junmei et al, 1999
+c3-c2-c2-c3   1    1.90        180.0             1.         Junmei et al, 1999
+c3-c3-c3-c3   1    0.18          0.0            -3.         Junmei et al, 1999
+c3-c3-c3-c3   1    0.25        180.0            -2.         Junmei et al, 1999
+c3-c3-c3-c3   1    0.20        180.0             1.         Junmei et al, 1999
+c3-c3-n3-c3   1    0.30          0.0            -3.         Junmei et al, 1999
+c3-c3-n3-c3   1    0.48        180.0             2.         Junmei et al, 1999
+c3-c3-os-c3   1    0.383         0.0            -3.
+c3-c3-os-c3   1    0.1         180.0             2.
+c3-c3-os-c    1    0.383         0.0            -3.         Junmei et al, 1999
+c3-c3-os-c    1    0.80        180.0             1.         Junmei et al, 1999
+c3-os-c3-os   1    0.10          0.0            -3.         Junmei et al, 1999
+c3-os-c3-os   1    0.85        180.0            -2.         Junmei et al, 1999
+c3-os-c3-os   1    1.35        180.0             1.         Junmei et al, 1999
+c3-os-c3-na   1    0.383         0.0            -3.         parm98.dat, TC,PC,PAK
+c3-os-c3-na   1    0.65          0.0             2.         Piotr et al.
+o -c -os-c3   1    2.70        180.0            -2.         Junmei et al, 1999
+o -c -os-c3   1    1.40        180.0             1.         Junmei et al, 1999
+os-c3-na-c2   1    0.00        000.0            -2.         parm98, TC,PC,PAK
+os-c3-na-c2   1    2.50          0.0             1.         parm98, TC,PC,PAK
+os-c3-c3-os   1    0.144         0.0            -3.         parm98, TC,PC,PAK
+os-c3-c3-os   1    1.175         0.0             2.         Piotr et al.
+os-c3-c3-oh   1    0.144         0.0            -3.         parm98, TC,PC,PAK
+os-c3-c3-oh   1    1.175         0.0             2.         parm98, TC,PC,PAK
+oh-c3-c3-oh   1    0.144         0.0            -3.         parm98, TC,PC,PAK
+oh-c3-c3-oh   1    1.175         0.0             2.         parm98, TC,PC,PAK
+f -c3-c3-f    1    1.20        180.0             1.         Junmei et al, 1999
+cl-c3-c3-cl   1    0.45        180.0             1.         Junmei et al, 1999
+br-c3-c3-br   1    0.00        180.0             1.         Junmei et al, 1999
+h1-c3-c3-os   1    0.25          0.0             1.         Junmei et al, 1999
+h1-c3-c3-oh   1    0.25          0.0             1.         Junmei et al, 1999
+h1-c3-c3-f    1    0.19          0.0             1.         Junmei et al, 1999
+h1-c3-c3-cl   1    0.25          0.0             1.         Junmei et al, 1999
+h1-c3-c3-br   1    0.55          0.0             1.         Junmei et al, 1999
+hc-c3-c3-os   1    0.25          0.0             1.         Junmei et al, 1999
+hc-c3-c3-oh   1    0.25          0.0             1.         Junmei et al, 1999
+hc-c3-c3-f    1    0.19          0.0             1.         Junmei et al, 1999
+hc-c3-c3-cl   1    0.25          0.0             1.         Junmei et al, 1999
+hc-c3-c3-br   1    0.55          0.0             1.         Junmei et al, 1999
+
+X -o -c -o          1.1          180.          2.           JCC,7,(1986),230
+X -X -c -o          10.5         180.          2.           JCC,7,(1986),230
+X -X -ca-ha         1.1          180.          2.           bsd.on C6H6 nmodes
+X -X -n -hn         1.1          180.          2.           JCC,7,(1986),230
+X -X -n2-hn         1.1          180.          2.           JCC,7,(1986),230
+X -X -na-hn         1.1          180.          2.           JCC,7,(1986),230
+X -c3-n -c3         1.1          180.          2.           JCC,7,(1986),230
+X -n2-ca-n2         10.5         180.          2.           JCC,7,(1986),230
+c -c2-c2-c3         1.1          180.          2.           dac guess, 9/94
+c -ca-ca-c3         1.1          180.          2.           dac guess, 9/94
+c -c3-n -hn         1.1          180.          2.           Junmei et al.1999
+c -c3-n -o          1.1          180.          2.           Junmei et al.1999
+c2-c2-na-c3         1.1          180.          2. 
+c2-c -c2-c3         1.1          180.          2. 
+c3-o -c -oh         1.1          180.          2. 
+c2-c3-c2-hc         1.1          180.          2.           Junmei et al.1999
+c2-c3-ca-hc         1.1          180.          2.           Junmei et al.1999
+c2-hc-c -o          1.1          180.          2.           Junmei et al.1999
+c3-o -c -oh         1.1          180.          2.
+c3-c2-c2-n2         1.1          180.          2.
+c3-c2-c2-na         1.1          180.          2.
+c3-ca-ca-n2         1.1          180.          2.
+c3-ca-ca-na         1.1          180.          2.
+ca-ca-ca-c2         1.1          180.          2. 
+ca-ca-ca-c3         1.1          180.          2. 
+ca-ca-ca-f          1.1          180.          2.           Junmei et al.1999
+ca-ca-ca-cl         1.1          180.          2.           Junmei et al.1999
+ca-ca-ca-br         1.1          180.          2.           Junmei et al.1999
+ca-ca-ca-i          1.1          180.          2.           Junmei et al.1999
+ca-ca-c -oh         1.1          180.          2.           (not used in tyr!)
+ca-ca-na-c3         1.1          180.          2.
+ca-c -ca-c3         1.1          180.          2. 
+ca-hc-c -o          1.1          180.          2.           Junmei et al.1999
+ca-n2-ca-n2         1.1          180.          2.           dac, 10/94
+hc-o -c -oh         1.1          180.          2.           Junmei et al.1999
+hc-o -c -os         1.1          180.          2.           
+n2-c2-ca-n2         1.1          180.          2.           dac guess, 9/94
+n2-ca-ca-c3         1.1          180.          2. 
+n2-ca-ca-n2         1.1          180.          2.           dac guess, 9/94
+na-ca-ca-c3         1.1          180.          2. 
+na-n2-ca-n2         1.1          180.          2.           dac, 10/94
+
+  hw  ow  0000.     0000.                                4.  flag for fast water
+
+n na n2 
+
+MOD4      RE
+  h1          1.3870  0.0157             Veenstra et al JCC,8,(1992),963 
+  h2          1.2870  0.0157             Veenstra et al JCC,8,(1992),963 
+  h3          1.1870  0.0157             Veenstra et al JCC,8,(1992),963 
+  h4          1.4090  0.0150             Spellmeyer, one electrowithdr. neighbor
+  h5          1.3590  0.0150             Spellmeyer, two electrowithdr. neighbor
+  ha          1.4590  0.0150             Spellmeyer 
+  hc          1.4870  0.0157             OPLS
+  hn          0.6000  0.0157            !Ferguson base pair geom.
+  ho          0.0000  0.0000             OPLS Jorgensen, JACS,110,(1988),1657
+  hp          0.6000  0.0157             same to hs (be careful !) 
+  hs          0.6000  0.0157             W. Cornell CH3SH --> CH3OH FEP
+  hw          0.0000  0.0000             OPLS Jorgensen, JACS,110,(1988),1657
+  hx          1.1000  0.0157             Veenstra et al JCC,8,(1992),963
+  o           1.6612  0.2100             OPLS
+  oh          1.7210  0.2104             OPLS 
+  os          1.6837  0.1700             OPLS ether
+  ow          1.7683  0.1520             TIP3P water model
+  c           1.9080  0.0860             OPLS
+  c1          1.9080  0.0860             cp C 
+  c2          1.9080  0.0860             sp2 atom in the middle of C=CD-CD=C
+  c3          1.9080  0.1094             OPLS
+  ca          1.9080  0.0860             OPLS
+  cc          1.9080  0.0860             OPLS
+  cd          1.9080  0.0860             OPLS
+  ce          1.9080  0.0860             OPLS
+  cf          1.9080  0.0860             OPLS
+  cg          1.9080  0.0860             OPLS
+  ch          1.9080  0.0860             OPLS
+  cp          1.9080  0.0860             OPLS
+  cq          1.9080  0.0860             OPLS
+  cu          1.9080  0.0860             OPLS
+  cv          1.9080  0.0860             OPLS
+  cx          1.9080  0.0860             OPLS
+  cy          1.9080  0.0860             OPLS
+  n           1.8240  0.1700             OPLS
+  n1          1.8240  0.1700             OPLS
+  n2          1.8240  0.1700             OPLS
+  n3          1.8240  0.1700             OPLS
+  n4          1.8240  0.1700             OPLS
+  na          1.8240  0.1700             OPLS
+  nb          1.8240  0.1700             OPLS
+  nc          1.8240  0.1700             OPLS
+  nd          1.8240  0.1700             OPLS
+  ne          1.8240  0.1700             OPLS
+  nf          1.8240  0.1700             OPLS
+  nh          1.8240  0.1700             OPLS
+  no          1.8240  0.1700             OPLS
+  s           2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  s2          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  s4          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  s6          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  sx          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  sy          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  sh          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  ss          2.0000  0.2500             W. Cornell CH3SH and CH3SCH3 FEP's
+  p2          2.1000  0.2000             JCC,7,(1986),230; 
+  p3          2.1000  0.2000             JCC,7,(1986),230; 
+  p4          2.1000  0.2000             JCC,7,(1986),230; 
+  p5          2.1000  0.2000             JCC,7,(1986),230; 
+  pb          2.1000  0.2000             JCC,7,(1986),230; 
+  px          2.1000  0.2000             JCC,7,(1986),230; 
+  py          2.1000  0.2000             JCC,7,(1986),230; 
+  f           1.75    0.061              Gough et al. JCC 13,(1992),963.
+  cl          1.948   0.265              Fox, JPCB,102,8070,(98),flex.mdl CHCl3
+  br          2.22    0.320              Junmei
+  i           2.35    0.40               JCC,7,(1986),230;  
+
+END
+
+
+
+----------------------------------------------------------------------------
+		Miscellaneous 
+	!!!! gaff is still in development, for some molecules, the current version 
+	may have some problems. Please find the latest parameter file from 
+	www.amber.ucsf.edu/antechamber.html
+
+(1)	Parameters for p4 are not enough
+(2)     For bond lengty, bond angle and torsional angle parameters, hc and ha 
+        are the generic names of aliphatic and aromatic hydrogen connected 
+        to carbon, respectively.
+(3) 	Defination priority of nitrogen: n>n3, n>n4, n>nh, n2>n, no>n, na>n
+        n4>nh
+(5)     Although the four atom types are same, maybe there are several different
+        parameters correspond to different bond types. You may need to use 
+        additional atom types to apply them correctly (with antechamber package,
+        you can easily do this). 
+(4) 	Polarizabilities: mg2+ 0.120, f- 0.9743
+----------------------------------------------------------------------------