Mercurial > repos > marcel > caddsuite_linux_x86_64
diff CADDSuite-1.0.1/data/fragments/PRO.db @ 9:2cff9609f2c7
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author | marcel |
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date | Tue, 15 Nov 2011 10:40:26 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/CADDSuite-1.0.1/data/fragments/PRO.db Tue Nov 15 10:40:26 2011 -0500 @@ -0,0 +1,85 @@ +<node>PRO + <node>Names + <node>Proline</node> + <node>Prolin</node> + <node>Pro</node> + <node>P</node> + </node> + <node>Atoms + <node>N<value>N 0.03190848 1.374047 -0.2465853</value></node> + <node>CA<value>C 0.4437964 0.4522487 -1.313841</value></node> + <node>HA<value>H -0.4329885 0.1122399 -1.866649</value></node> + <node>C<value>C 1.153984 -0.7795747 -0.7384319</value></node> + <node>O<value>O 2.396496 -0.7261156 -0.5988901</value></node> + <node>CB<value>C 1.34565 1.283736 -2.23033</value></node> + <node>1HB<value>H 2.062533 0.6767905 -2.785621</value></node> + <node>2HB<value>H 0.7182986 1.840951 -2.927554</value></node> + <node>CG<value>C 2.02933 2.275858 -1.278275</value></node> + <node>1HG<value>H 3.057449 1.966999 -1.081919</value></node> + <node>2HG<value>H 2.018846 3.280874 -1.702292</value></node> + <node>CD<value>C 1.21179 2.210818 0.01815094</value></node> + <node>1HD<value>H 0.9135454 3.204023 0.3557259</value></node> + <node>2HD<value>H 1.815136 1.733186 0.791898</value></node> + <node>OXT<value>O 0.4228693 -1.712297 -0.3395816</value></node> + <node>1H<value>H -0.2823305 0.8858488 0.5799416</value></node> + <node>2H<value>H -0.7056003 1.96474 -0.6034356</value></node> + </node> + <node>Bonds + <node>5<value>CA N s</value></node> + <node>9<value>HA CA s</value></node> + <node>10<value>C CA s</value></node> + <node>13<value>O C d</value></node> + <node>14<value>CB CA s</value></node> + <node>18<value>1HB CB s</value></node> + <node>19<value>2HB CB s</value></node> + <node>20<value>CG CB s</value></node> + <node>24<value>1HG CG s</value></node> + <node>25<value>2HG CG s</value></node> + <node>26<value>CD N s</value></node> + <node>27<value>CD CG s</value></node> + <node>30<value>1HD CD s</value></node> + <node>31<value>2HD CD s</value></node> + <node>32<value>OXT C s</value></node> + <node>33<value>1H N s</value></node> + <node>34<value>2H N s</value></node> + </node> + <node>Connections + <node>N-term<value>N C-term s 1.33 0.5</value></node> + <node>C-term<value>C N-term s 1.33 0.5</value></node> + </node> + <node>Properties + <node>AMINO_ACID</node> + </node> + <node>Variants + <node>Default + <node>Delete + <node>OXT</node> + <node>1H</node> + <node>2H</node> + </node> + </node> + <node>PRO-M + <node>Properties + <node>C_TERMINAL</node> + <node>N_TERMINAL</node> + </node> + </node> + <node>PRO-C + <node>Delete + <node>1H</node> + <node>2H</node> + </node> + <node>Properties + <node>C_TERMINAL</node> + </node> + </node> + <node>PRO-N + <node>Delete + <node>OXT</node> + </node> + <node>Properties + <node>N_TERMINAL</node> + </node> + </node> + </node> +</node>