Mercurial > repos > marcel > caddsuite_mac10_6
diff CADDSuite-1.0.1/data/OpenBabel/ghemical.prm @ 5:e30a41af9d2b
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author | marcel |
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date | Tue, 15 Nov 2011 10:53:16 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/CADDSuite-1.0.1/data/OpenBabel/ghemical.prm Tue Nov 15 10:53:16 2011 -0500 @@ -0,0 +1,476 @@ +// +// The parameters int his file are taken from ghemical. +// + +// atomtypes and typerules 09.05.2000 (based on Tripos 5.2 and MMFF94) +// [SMARTS] [atomtype id number] [typerule] [description] +// +// must be sorted according to the ELEMENT and COMPLEXITY OF THE TYPERULE!!! + +atom [*] FFFF +atom [#1] 0100 (-*) "general hydrogen" +atom [#6] 0600 (-*) "general sp3 carbon" +atom [#6]=* 0601 (=*) "general sp2 carbon" +atom [#6]#* 0602 (#*) "general sp carbon" +atom [#6](=*)=* 0602 (=*,=*) "allenic sp carbon" +atom [c] 0603 (~*,~*) "aromatic sp2 carbon" +//atom [#6^3r3] 0604 ([-*?*-]) "sp3 carbon in a 3-membered ring" +//atom [#6^3r4] 0605 ([-*?*?*-]) "sp3 carbon in a 4-membered ring" +atom [N] 0700 (-*) "general sp3 nitrogen" +atom [N]=* 0701 (=*) "general sp2 nitrogen" +atom [N]#* 0702 (#*) "general sp nitrogen" +atom [n] 0703 (~*,~*) "aromatic sp2 nitrogen" +atom [ND4] 0704 (-*,-*,-*,-*) "ammonium nitrogen" +atom [#7][C]=O 0705 (-C(=O)) "amide nitrogen" +atom [O] 0800 (-*) "general sp3 oxygen" +atom [O]=* 0801 (=*) "general sp2 oxygen" +atom [F]* 0900 (-*) "general fluorine" +atom [P] 0F00 (-*) "general sp3 phosphorus" +atom [S] 1000 (-*) "general sp3 sulphur" +atom [S]=* 1001 (=*) "general sp2 sulphur" +atom [S]=[#8] 1002 (=O) "sulfoxide sulphur" +atom [S](=O)=O 1003 (=O,=O) "sulfone sulphur" +atom [Cl]* 1100 (-*) "general chlorine" +atom [Br]* 2300 (-*) "general bromine" +atom [I]* 3500 (-*) "general iodine" + +// bond stretching parameters 09.05.2000 (based on Tripos 5.2 and MMFF94) +// [id #1] [id #2] [bondtype] [opt] [fc] +// +// wildcard atomtype is FFFF !!!!!!!!!!!!!!!!!!!!!!!!!!! +// wildcard atomtype is FFFF !!!!!!!!!!!!!!!!!!!!!!!!!!! +// wildcard atomtype is FFFF !!!!!!!!!!!!!!!!!!!!!!!!!!! +// +// parameters containing those should be left last since the first matching +// one is chosen. that is, choose normal parameters if there is any matching +// one, and take wildcarded one only if there is no better choice... +// +// [opt] = Å +// [fc] = kcal/(mol * Å^2) + +bond 0602 0602 T 1.204 1400.0 +bond 0602 0602 S 1.380 700.0 +bond 2300 0601 S 1.890 500.0 +bond 0602 0601 S 1.440 1340.0 +bond 0602 0601 D 1.440 1340.0 +bond 0601 0601 D 1.335 1340.0 +bond 0601 0601 S 1.470 700.0 +bond 0602 0600 S 1.458 640.0 +bond 0601 0600 S 1.501 639.0 +bond 0600 0600 S 1.540 633.6 +bond 2300 0603 S 1.850 500.0 +bond 0602 0603 S 1.440 1340.0 +bond 0601 0603 S 1.510 1340.0 +bond 0600 0603 S 1.525 640.0 +bond 0603 0603 C 1.395 1400.0 +bond 0603 0603 S 1.480 1000.0 +bond 0601 1100 S 1.750 520.0 +bond 0600 1100 S 1.767 600.0 +bond 0603 1100 S 1.750 513.4 +bond 0601 2300 S 1.850 520.0 +bond 0600 2300 S 1.867 600.0 +bond 0603 2300 S 1.850 513.4 +bond 0601 0900 S 1.330 1200.0 +bond 0600 0900 S 1.360 600.0 +bond 0603 0900 S 1.330 500.0 +bond 0602 0100 S 1.056 700.0 +bond 0601 0100 S 1.089 692.0 +bond 0600 0100 S 1.100 662.4 +bond 0603 0100 S 1.084 692.0 +bond 0600 3500 S 2.050 490.0 //added 20050225 +bond 0601 3500 S 2.050 490.0 //added 20050225 +bond 0602 3500 S 2.050 490.0 //added 20050225 +bond 0603 3500 S 2.050 490.0 +bond 0602 0702 T 1.158 1600.0 +bond 0602 0701 S 1.330 1300.0 +bond 0602 0701 D 1.330 1300.0 +bond 0601 0701 D 1.270 1305.9 +bond 0601 0701 S 1.444 1300.0 +bond 0600 0701 S 1.440 760.2 +bond 0603 0701 S 1.346 1305.9 +bond 0701 0701 D 1.346 1305.9 +bond 0701 0701 S 1.418 1300.0 +bond 0601 0700 S 1.330 1300.0 +bond 0600 0700 S 1.470 760.0 +bond 0603 0700 S 1.410 720.0 +bond 0100 0700 S 1.080 692.0 +bond 0601 0704 S 1.330 1300.0 +bond 0600 0704 S 1.470 760.0 +bond 0603 0704 S 1.410 720.0 +bond 0601 0705 S 1.345 870.1 +bond 0600 0705 S 1.450 677.6 +bond 0603 0705 S 1.416 1090.1 +bond 0100 0705 S 1.000 700.0 +bond 0701 0705 S 1.440 667.6 +bond 0705 0705 S 1.450 744.5 +bond 0603 0703 C 1.346 1305.9 +bond 0703 0703 C 1.330 1400.0 +bond 0601 0801 D 1.220 1555.2 +bond 0705 0801 S 1.240 1120.0 +bond 0705 0801 D 1.210 680.0 +bond 0601 0800 S 1.330 699.8 +bond 0600 0800 S 1.430 618.9 +bond 0603 0800 S 1.390 700.0 +bond 0100 0800 S 0.950 1007.5 +bond 0701 0800 S 1.405 1200.0 +bond 0705 0800 S 1.400 620.0 +bond 0800 0800 S 1.480 1172.2 +bond 0600 0F00 S 1.830 407.6 +bond 0801 0F00 S 1.490 1400.0 +bond 0801 0F00 D 1.490 1400.0 +bond 0800 0F00 S 1.600 800.0 +bond 0601 1001 D 1.710 400.0 +bond 0600 1001 S 1.800 381.6 +bond 0603 1001 S 1.740 700.0 +bond 0601 1000 S 1.780 360.0 +bond 0600 1000 S 1.817 381.6 +bond 0603 1000 S 1.770 360.0 +bond 0700 1000 S 1.625 360.0 +bond 0704 1000 S 1.625 360.0 +bond 0801 1000 D 1.450 600.0 +bond 1000 1000 S 2.030 600.0 +bond 0601 1002 S 1.710 360.0 +bond 0600 1002 S 1.800 381.6 +bond 0801 1002 D 1.450 600.0 +bond 0800 1002 S 1.500 600.0 +bond 0600 1003 S 1.800 381.6 +bond 0801 1003 D 1.450 600.0 +bond 0800 1003 S 1.500 600.0 +bond FFFF 0100 S 1.008 700.0 + +// angle bending parameters 09.05.2000 (based on Tripos 5.2 and MMFF94) +// [id #1] [id #2] [id #3] [bt12][bt23] [opt] [fc] +// +// ordering should be made similarly as in parameters1.txt!!!!!!! +// original Tripos 5.2 did not contain the bond types here at all... +// +// [opt] = deg +// [fc] = kcal/(mol * deg^2) + +angle 0602 0602 0601 ?? 180.0 0.040 +angle 0601 0602 0702 ?? 180.0 0.040 +angle 0600 0602 0702 ?? 180.0 0.040 +angle 0603 0602 0702 ?? 180.0 0.040 +angle 0702 0602 0800 ?? 180.0 0.040 +angle 2300 0601 2300 ?? 120.0 0.020 +angle 2300 0601 0601 ?? 120.0 0.036 +angle 0601 0601 0601 ?? 121.7 0.018 +angle 0602 0601 0600 ?? 120.0 0.024 +angle 0601 0601 0600 ?? 121.0 0.024 +angle 0600 0601 0600 ?? 116.4 0.046 +angle 0602 0601 0603 ?? 120.0 0.024 +angle 0601 0601 0603 ?? 120.0 0.026 +angle 0600 0601 0603 ?? 120.0 0.024 +angle 0603 0601 0603 ?? 120.0 0.024 +angle 0601 0601 1100 ?? 120.0 0.036 +angle 0603 0601 1100 ?? 120.0 0.036 +angle 1100 0601 1100 ?? 122.0 0.030 +angle 0601 0601 2300 ?? 120.0 0.036 +angle 0603 0601 2300 ?? 120.0 0.036 +angle 2300 0601 2300 ?? 122.0 0.030 +angle 0602 0601 0701 ?? 123.0 0.070 +angle 0601 0601 0701 ?? 120.0 0.024 +angle 0600 0601 0701 ?? 118.0 0.020 +angle 0603 0601 0701 ?? 120.0 0.040 +angle 0601 0601 0700 ?? 120.0 0.024 +angle 0600 0601 0700 ?? 118.0 0.040 +angle 0701 0601 0700 ?? 121.8 0.030 +angle 0700 0601 0700 ?? 116.4 0.030 +angle 0601 0601 0705 ?? 120.0 0.024 +angle 0600 0601 0705 ?? 117.0 0.020 +angle 0603 0601 0705 ?? 120.0 0.040 +angle 0701 0601 0705 ?? 123.0 0.070 +angle 0705 0601 0705 ?? 120.0 0.030 +angle 0602 0601 0801 ?? 120.0 0.060 +angle 0601 0601 0801 ?? 120.0 0.026 +angle 0600 0601 0801 ?? 120.0 0.026 +angle 0603 0601 0801 ?? 120.0 0.026 +angle 0700 0601 0801 ?? 120.0 0.026 +angle 0705 0601 0801 ?? 123.0 0.030 +angle 0601 0601 0800 ?? 120.0 0.072 +angle 0600 0601 0800 ?? 114.0 0.030 +angle 0603 0601 0800 ?? 120.0 0.030 +angle 0705 0601 0800 ?? 110.5 0.014 +angle 0801 0601 0800 ?? 120.0 0.030 +angle 0701 0601 1000 ?? 125.6 0.028 +angle 0705 0601 1000 ?? 111.5 0.030 +angle 0801 0601 1000 ?? 125.0 0.016 +angle 0601 0600 0601 ?? 109.5 0.018 +angle 0602 0600 0600 ?? 109.5 0.024 +angle 0601 0600 0600 ?? 109.5 0.018 +angle 0600 0600 0600 ?? 109.5 0.024 +angle 0601 0600 0603 ?? 109.5 0.018 +angle 0600 0600 0603 ?? 109.5 0.024 +angle 0603 0600 0603 ?? 109.5 0.018 +angle 0600 0600 1100 ?? 109.5 0.020 +angle 1100 0600 1100 ?? 109.5 0.020 +angle 0600 0600 2300 ?? 109.5 0.020 +angle 2300 0600 2300 ?? 109.5 0.020 +angle 0603 0600 0900 ?? 110.0 0.024 +angle 0900 0600 0900 ?? 109.5 0.040 +angle 0601 0600 0100 ?? 110.0 0.016 +angle 0100 0600 0100 ?? 109.5 0.024 +angle 0600 0600 0701 ?? 109.5 0.018 +angle 0601 0600 0700 ?? 109.5 0.018 +angle 0600 0600 0700 ?? 109.5 0.024 +angle 0603 0600 0700 ?? 109.5 0.018 +angle 0601 0600 0705 ?? 109.5 0.022 +angle 0600 0600 0705 ?? 109.5 0.018 +angle 0603 0600 0705 ?? 109.5 0.020 +angle 0100 0600 0705 ?? 110.0 0.020 +angle 0701 0600 0705 ?? 109.5 0.020 +angle 0705 0600 0705 ?? 109.5 0.040 +angle 0900 0600 0703 ?? 109.5 0.040 +angle 0601 0600 0800 ?? 109.5 0.022 +angle 0600 0600 0800 ?? 109.5 0.022 +angle 0603 0600 0800 ?? 109.5 0.018 +angle 0705 0600 0800 ?? 109.5 0.020 +angle 0800 0600 0800 ?? 109.5 0.020 +angle 0600 0600 0F00 ?? 112.0 0.014 +angle 0601 0600 1001 ?? 109.5 0.018 +angle 0600 0600 1001 ?? 109.5 0.018 +angle 0705 0600 1001 ?? 109.5 0.040 +angle 0601 0600 1000 ?? 107.8 0.018 +angle 0600 0600 1000 ?? 107.8 0.018 +angle 0603 0600 1000 ?? 107.8 0.018 +angle 0705 0600 1000 ?? 109.5 0.024 +angle 0800 0600 1000 ?? 107.8 0.020 +angle 2300 0603 0603 ?? 120.0 0.036 +angle 0601 0603 0603 ?? 120.0 0.024 +angle 0600 0603 0603 ?? 120.0 0.024 +angle 0603 0603 0603 ?? 120.0 0.024 +angle 0603 0603 1100 ?? 120.0 0.036 +angle 0603 0603 2300 ?? 120.0 0.036 +angle 0603 0603 0900 ?? 120.0 0.036 +angle 0603 0603 3500 ?? 120.0 0.036 +angle 0600 0603 0701 ?? 120.0 0.040 +angle 0603 0603 0701 ?? 120.0 0.040 +angle 0701 0603 0701 ?? 120.0 0.040 +angle 0603 0603 0700 ?? 120.0 0.062 +angle 0600 0603 0705 ?? 120.0 0.040 +angle 0603 0603 0705 ?? 120.0 0.062 +angle 0701 0603 0705 ?? 118.0 0.040 +angle 0705 0603 0705 ?? 120.0 0.030 +angle 0601 0603 0703 ?? 120.0 0.040 +angle 0600 0603 0703 ?? 120.0 0.040 +angle 0603 0603 0703 ?? 120.0 0.024 +angle 0705 0603 0703 ?? 118.0 0.040 +angle 0600 0603 0800 ?? 120.0 0.040 +angle 0603 0603 0800 ?? 120.0 0.062 +angle 0603 0603 1001 ?? 120.0 0.062 +angle 0603 0603 1000 ?? 120.0 0.062 +angle 0602 0701 0601 ?? 120.0 0.040 +angle 0601 0701 0601 ?? 123.0 0.080 +angle 0601 0701 0600 ?? 110.0 0.082 +angle 0601 0701 0603 ?? 123.0 0.080 +angle 0600 0701 0603 ?? 110.0 0.082 +angle 0603 0701 0603 ?? 120.0 0.040 +angle 0601 0701 0701 ?? 112.0 0.044 +angle 0600 0701 0701 ?? 118.0 0.040 +angle 0603 0701 0701 ?? 118.0 0.040 +angle 0601 0701 0705 ?? 120.0 0.044 +angle 0601 0701 0800 ?? 105.0 0.044 +angle 0601 0700 0600 ?? 110.0 0.040 +angle 0600 0700 0600 ?? 109.5 0.018 +angle 0600 0700 0603 ?? 118.0 0.040 +angle 0603 0700 0603 ?? 118.0 0.040 +angle 0600 0700 1001 ?? 109.5 0.040 +angle 0600 0704 0600 ?? 109.5 0.018 +angle 0601 0705 0601 ?? 120.0 0.018 +angle 0601 0705 0600 ?? 118.0 0.044 +angle 0600 0705 0600 ?? 122.0 0.040 +angle 0601 0705 0603 ?? 120.0 0.052 +angle 0600 0705 0603 ?? 118.0 0.044 +angle 0603 0705 0603 ?? 120.0 0.044 +angle 0601 0705 0100 ?? 119.0 0.016 +angle 0600 0705 0100 ?? 117.0 0.020 +angle 0601 0705 0701 ?? 120.0 0.018 +angle 0600 0705 0701 ?? 120.0 0.024 +angle 0603 0705 0701 ?? 109.5 0.044 +angle 0601 0705 0705 ?? 120.0 0.018 +angle 0600 0705 0705 ?? 120.0 0.024 +angle 0603 0705 0705 ?? 120.0 0.052 +angle 0601 0705 0801 ?? 120.0 0.024 +angle 0600 0705 0801 ?? 120.0 0.020 +angle 0603 0705 0801 ?? 120.0 0.024 +angle 0801 0705 0801 ?? 120.0 0.020 +angle 0603 0703 0603 ?? 120.0 0.040 +angle 0601 0800 0601 ?? 110.0 0.020 +angle 0601 0800 0600 ?? 109.5 0.044 +angle 0600 0800 0600 ?? 109.5 0.044 +angle 0601 0800 0603 ?? 110.0 0.020 +angle 0600 0800 0603 ?? 110.0 0.020 +angle 0603 0800 0603 ?? 110.0 0.020 +angle 0601 0800 0701 ?? 108.5 0.044 +angle 0600 0800 0800 ?? 103.9 0.094 +angle 0600 0800 0F00 ?? 120.0 0.010 +angle 0801 0F00 0801 ?? 109.5 0.020 +angle 0801 0F00 0800 ?? 109.5 0.020 +angle 0800 0F00 0800 ?? 109.5 0.020 +angle 0600 1001 0700 ?? 111.0 0.040 +angle 0603 1001 0700 ?? 111.0 0.040 +angle 0601 1000 0600 ?? 94.3 0.022 +angle 0600 1000 0600 ?? 98.0 0.020 +angle 0603 1000 0603 ?? 97.5 0.062 +angle 0603 1000 1000 ?? 102.9 0.060 +angle 0801 1003 0801 ?? 118.0 0.040 +angle FFFF 0601 0100 ?? 120.0 0.012 +angle FFFF 0600 0100 ?? 109.5 0.016 +angle FFFF 1002 0801 ?? 107.0 0.040 +angle FFFF 1003 0801 ?? 107.0 0.040 +angle FFFF 0602 FFFF ?? 180.0 0.040 +angle FFFF 0601 FFFF ?? 120.0 0.024 +angle FFFF 0600 FFFF ?? 109.5 0.020 +angle FFFF 0603 FFFF ?? 120.0 0.024 +angle FFFF 0702 FFFF ?? 180.0 0.080 +angle FFFF 0701 FFFF ?? 120.0 0.040 +angle FFFF 0700 FFFF ?? 109.5 0.040 +angle FFFF 0704 FFFF ?? 109.5 0.010 +angle FFFF 0705 FFFF ?? 120.0 0.020 +angle FFFF 0703 FFFF ?? 120.0 0.020 +angle FFFF 0800 FFFF ?? 109.5 0.020 +angle FFFF 0F00 FFFF ?? 109.5 0.020 +angle FFFF 1001 FFFF ?? 110.5 0.040 +angle FFFF 1000 FFFF ?? 97.0 0.020 + +// torsion parameters 09.05.2000 (based on Tripos 5.2 and MMFF94) +// [id #1] [id #2] [id #3] [id #4] [bt12][bt23][bt34] [k] [n] [s] +// +// ordering should be made similarly as in parameters1.txt!!!!!!! +// original Tripos 5.2 did not contain all these bond types here... +// +// [k] = kcal/mol (rotational barrier ???) + +torsion 0801 0601 0600 0600 ?S? 0.700 - 3.0 +torsion 0601 0600 0600 0601 ?S? 0.040 + 3.0 +torsion 0601 0600 0600 0600 ?S? 0.126 + 3.0 +torsion 0600 0600 0600 0600 ?S? 0.500 + 3.0 +torsion 0601 0601 0600 0601 ?S? 0.126 - 3.0 +torsion 0601 0601 0600 0100 ?S? 0.273 - 3.0 +torsion 0600 0601 0600 0601 ?S? 0.126 + 3.0 +torsion 0600 0601 0600 0600 ?S? 0.126 + 3.0 +torsion 0600 0601 0600 0100 ?S? 0.274 + 3.0 +torsion 0100 0601 0600 0601 ?S? 0.274 + 3.0 +torsion 0100 0601 0600 0600 ?S? 0.274 + 3.0 +torsion 0100 0601 0600 0100 ?S? 0.274 + 3.0 +torsion 0601 0601 0600 0600 ?S? 0.126 - 3.0 +torsion FFFF 0601 0600 0601 ?S? 0.126 + 3.0 +torsion FFFF 0601 0600 0600 ?S? 0.126 + 3.0 +torsion FFFF 0601 0600 0100 ?S? 0.274 + 3.0 +torsion FFFF 0600 0600 0100 ?S? 0.320 + 3.0 +torsion 0601 0601 0600 FFFF ?S? 0.126 - 3.0 +torsion 0600 0601 0600 FFFF ?S? 0.126 + 3.0 +torsion 0100 0601 0600 FFFF ?S? 0.274 + 3.0 +torsion FFFF 0602 0602 FFFF ?T? 0.000 + 1.0 +torsion FFFF 0602 0602 FFFF ?S? 0.000 + 1.0 +torsion FFFF 0602 0601 FFFF ?S? 0.000 + 1.0 +torsion FFFF 0602 0601 FFFF ?D? 0.000 + 1.0 +torsion FFFF 0601 0601 FFFF ?D? 12.500 - 2.0 +torsion FFFF 0601 0601 FFFF ?S? 1.424 - 2.0 +torsion FFFF 0602 0600 FFFF ?S? 0.000 + 1.0 +torsion FFFF 0601 0600 FFFF ?S? 0.120 - 3.0 +torsion FFFF 0600 0600 FFFF ?S? 0.200 + 3.0 +torsion FFFF 0602 0603 FFFF ?S? 0.000 + 1.0 +torsion FFFF 0601 0603 FFFF ?S? 1.600 - 2.0 +torsion FFFF 0600 0603 FFFF ?S? 0.120 - 3.0 +torsion FFFF 0603 0603 FFFF ?C? 2.000 - 2.0 +torsion FFFF 0603 0603 FFFF ?S? 0.600 - 2.0 +torsion FFFF 0602 0701 FFFF ?S? 0.000 + 1.0 +torsion FFFF 0602 0701 FFFF ?D? 0.000 + 1.0 +torsion FFFF 0601 0701 FFFF ?D? 12.000 - 2.0 +torsion FFFF 0601 0701 FFFF ?S? 12.000 - 2.0 +torsion FFFF 0600 0701 FFFF ?S? 0.400 - 3.0 +torsion FFFF 0603 0701 FFFF ?S? 1.600 - 2.0 +torsion FFFF 0701 0701 FFFF ?D? 1.600 - 2.0 +torsion FFFF 0701 0701 FFFF ?S? 1.600 - 2.0 +torsion FFFF 0601 0700 FFFF ?S? 0.120 - 3.0 +torsion FFFF 0600 0700 FFFF ?S? 0.200 + 3.0 +torsion FFFF 0603 0700 FFFF ?S? 0.120 - 3.0 +torsion FFFF 0700 0700 FFFF ?S? 0.200 + 3.0 +torsion FFFF 0601 0705 FFFF ?S? 6.460 - 2.0 +torsion FFFF 0600 0705 FFFF ?S? 0.200 + 3.0 +torsion FFFF 0603 0705 FFFF ?S? 1.600 - 2.0 +torsion FFFF 0701 0705 FFFF ?S? 1.600 - 2.0 +torsion FFFF 0700 0705 FFFF ?S? 0.120 - 3.0 +torsion FFFF 0705 0705 FFFF ?S? 1.600 - 2.0 +torsion FFFF 0603 0703 FFFF ?C? 1.600 - 2.0 +torsion FFFF 0601 0800 FFFF ?S? 5.800 - 2.0 +torsion FFFF 0600 0800 FFFF ?S? 1.200 + 3.0 +torsion FFFF 0603 0800 FFFF ?S? 1.200 - 2.0 +torsion FFFF 0701 0800 FFFF ?S? 1.000 + 2.0 +torsion FFFF 0700 0800 FFFF ?S? 0.200 + 3.0 +torsion FFFF 0601 0F00 FFFF ?S? 1.000 - 2.0 +torsion FFFF 0600 0F00 FFFF ?S? 0.400 + 3.0 +torsion FFFF 0603 0F00 FFFF ?S? 1.000 + 3.0 +torsion FFFF 0800 0F00 FFFF ?S? 0.400 + 3.0 +torsion FFFF 0601 1001 FFFF ?D? 1.000 - 2.0 +torsion FFFF 0600 1001 FFFF ?S? 0.400 + 3.0 +torsion FFFF 0603 1001 FFFF ?S? 1.000 + 3.0 +torsion FFFF 0700 1001 FFFF ?S? 0.400 + 3.0 +torsion FFFF 0601 1000 FFFF ?S? 1.000 - 2.0 +torsion FFFF 0600 1000 FFFF ?S? 0.400 + 3.0 +torsion FFFF 0603 1000 FFFF ?S? 1.000 + 3.0 +torsion FFFF 1000 1000 FFFF ?S? 4.000 + 3.0 + +// lenjon-parameters 09.05.2000 (based on Tripos 5.2 and MMFF94) +// [id] [r] [k] +// +// [r] = Å +// [k] = kcal/mol + +vdw 0100 1.50 0.042 +vdw 0600 1.70 0.107 +vdw 0601 1.70 0.107 +vdw 0602 1.70 0.107 +vdw 0603 1.70 0.107 +vdw 0604 1.70 0.107 +vdw 0605 1.70 0.107 +vdw 0700 1.55 0.095 +vdw 0701 1.55 0.095 +vdw 0702 1.55 0.095 +vdw 0703 1.55 0.095 +vdw 0704 1.55 0.095 +vdw 0705 1.55 0.095 +vdw 0800 1.52 0.116 +vdw 0801 1.52 0.116 +vdw 0900 1.47 0.109 +vdw 0F00 1.80 0.314 +vdw 1000 1.80 0.314 +vdw 1001 1.80 0.314 +vdw 1002 1.80 0.314 +vdw 1003 1.80 0.314 +vdw 1100 1.75 0.314 +vdw 2300 1.85 0.434 +vdw 3500 1.98 0.623 +vdw FFFF 1.50 0.042 + +// atomic charge parameters 09.05.2000 (based on Tripos 5.2 and MMFF94) +// [id #1] [id #2] [delta] +// +// THE NUMERICAL VALUES HERE ARE NOT PROPERLY CHECKED!!! +// +// sign of [delta] is inverted if order of atoms is switched... +// sign of [delta] is inverted if order of atoms is switched... +// sign of [delta] is inverted if order of atoms is switched... + +charge 0601 0100 S +0.100 +charge 0602 0100 S +0.200 +charge 0603 0100 S +0.100 +charge 0604 0100 S +0.050 +charge 0700 0100 S +0.100 +charge 0701 0100 S +0.200 +charge 0702 0100 S +0.250 +charge 0703 0100 S +0.250 +charge 0704 0100 S +0.200 +charge 0705 0100 S +0.150 +charge 0800 0100 S +0.250 +charge 0801 0601 D +0.100 +charge 0900 0100 S +0.500 +charge 0900 0600 S +0.125 +charge 1002 0801 D +0.200 +charge 1003 0801 D +0.200 +charge 1100 0600 S +0.150 +charge 2300 0600 S +0.175 +charge 3500 0600 S +0.200 + +