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diff CADDSuite-1.0.1/data/OpenBabel/resdata.txt @ 5:e30a41af9d2b
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author | marcel |
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date | Tue, 15 Nov 2011 10:53:16 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/CADDSuite-1.0.1/data/OpenBabel/resdata.txt Tue Nov 15 10:53:16 2011 -0500 @@ -0,0 +1,1139 @@ +############################################################################## +# # +# Open Babel file: resdata.txt # +# # +# Copyright (c) 1998-2001 by OpenEye Scientific Software, Inc. # +# Some portions Copyright (c) 2001-2003 by Geoffrey R. Hutchison # +# Part of the Open Babel package, under the GNU General Public License (GPL)# +# # +# Residue records are specified as follows: (used by data.cpp:OBResidueData)# +# RES <name> # +# ATOM Name Type Hybridization (hydrogens are implicit) # +# BOND Name1 Name2 BondOrder (where Name1, Name2 are ATOM records) # +# END # +# # +############################################################################## + +RES ALA +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 3HB CB 1 +END + +RES ARG +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C3 3 +ATOM NE Ng+ 2 +ATOM CZ C+ 2 +ATOM NH2 Ng+ 2 +ATOM NH1 Ng+ 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD NE 1 +BOND NE CZ 1 +BOND CZ NH2 2 +BOND CZ NH1 1 +BOND N H 1 +BOND HN N 1 +BOND NH1 1HH1 1 +BOND NH1 2HH1 1 +BOND NE HE 1 +BOND NH2 1HH2 1 +BOND NH2 2HH2 1 +BOND NH1 HH1 1 +BOND NH2 HH2 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD CD 1 +BOND 2HD CD 1 +BOND 1HG CG 1 +BOND 2HG CG 1 +END + +RES ARZ +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C3 3 +ATOM NE Ng+ 2 +ATOM CZ C+ 2 +ATOM NH2 Ng+ 2 +ATOM NH1 Ng+ 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD NE 1 +BOND NE CZ 1 +BOND CZ NH2 1 +BOND CZ NH1 2 +BOND N H 1 +BOND N HN 1 +BOND NH1 HH1 1 +BOND NE HE 1 +BOND NH2 1HH2 1 +BOND NH2 2HH2 1 +END + +RES ASN +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM ND2 Nam 2 +ATOM OD1 O2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG ND2 1 +BOND CG OD1 2 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND ND2 1HD2 1 +BOND ND2 2HD2 1 +BOND ND2 HD2 1 +END + +RES ASP +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C2 2 +ATOM OD2 O2 2 +ATOM OD1 O3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG OD2 2 +BOND CG OD1 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +END + +RES ASH +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C2 2 +ATOM OD2 O3 3 +ATOM OD1 O2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG OD2 1 +BOND CG OD1 2 +BOND N H 1 +BOND N HN 1 +BOND OD2 HD2 1 +END + +RES CYS +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM SG S3 3 +BOND SG CB 1 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB SG 1 +BOND N H 1 +BOND N HN 1 +BOND CA HA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND SG HG 1 +END + +RES CYX +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM SG S3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB SG 1 +BOND N H 1 +END + +RES GLN +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C2 2 +ATOM NE2 Nam 2 +ATOM OE1 O2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD NE2 1 +BOND CD OE1 2 +BOND N H 1 +BOND N HN 1 +BOND CA HA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HG CG 1 +BOND 2HG CG 1 +BOND NE2 1HE2 1 +BOND NE2 2HE2 1 +BOND NE2 HE2 1 +END + +RES GLU +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C2 2 +ATOM OE2 O3 3 +ATOM OE1 O2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD OE2 1 +BOND CD OE1 2 +BOND N H 1 +BOND N 1H 1 +BOND N 2H 1 +BOND N 3H 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HG CG 1 +BOND 2HG CG 1 +END + +RES GLY +ATOM CA C3 3 +ATOM N Nam 2 +ATOM C Cac 2 +ATOM O O2 2 +BOND CA N 1 +BOND CA C 1 +BOND C O 2 +BOND N H 1 +BOND N HN 1 +BOND 1HA CA 1 +BOND 2HA CA 1 +END + +RES GLZ +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C2 2 +ATOM OE2 O3 3 +ATOM OE1 O2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD OE2 1 +BOND CD OE1 2 +BOND N H 1 +BOND OE2 HE2 1 +END + +RES HID +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C C3 3 +ATOM O O2 2 +ATOM CG C2 2 +ATOM ND1 Npl 2 +ATOM CD2 C2 2 +ATOM NE2 N2 2 +ATOM CE1 C2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG ND1 1 +BOND CG CD2 2 +BOND CD2 NE2 1 +BOND NE2 CE1 2 +BOND CE1 ND1 1 +BOND N H 1 +BOND ND1 HD1 1 +END + +RES HIE +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C2 2 +ATOM ND1 Npl 2 +ATOM CD2 C2 2 +ATOM NE2 Npl 2 +ATOM CE1 C3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG ND1 1 +BOND CG CD2 2 +BOND CD2 NE2 1 +BOND NE2 CE1 1 +BOND CE1 ND1 1 +BOND N H 1 +BOND NE2 HE2 1 +END + +RES HIP +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C2 2 +ATOM ND1 Npl 2 +ATOM CD2 C2 2 +ATOM NE2 Npl 2 +ATOM CE1 C3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG ND1 1 +BOND CG CD2 2 +BOND CD2 NE2 1 +BOND NE2 CE1 1 +BOND CE1 ND1 1 +BOND N H 1 +BOND ND1 HD1 1 +BOND NE2 HE2 1 +END + +RES HIS +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C2 2 +ATOM ND1 Npl 2 +ATOM CD2 C2 2 +ATOM NE2 Npl 2 +ATOM CE1 C2 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG ND1 1 +BOND CG CD2 2 +BOND CD2 NE2 1 +BOND NE2 CE1 2 +BOND CE1 ND1 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD ND1 1 +BOND 2HD CD2 1 +BOND 1HE CE1 1 +BOND ND1 HD1 1 +BOND NE2 HE2 1 +END + +RES ILE +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG2 C3 3 +ATOM CG1 C3 3 +ATOM CD1 C3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG2 1 +BOND CB CG1 1 +BOND CG1 CD1 1 +BOND N H 1 +BOND N HN 1 +BOND CA HA 1 +BOND HB CB 1 +BOND 1HG1 CG1 1 +BOND 2HG1 CG1 1 +BOND 1HG2 CG2 1 +BOND 2HG2 CG2 1 +BOND 3HG2 CG2 1 +BOND 1HD1 CD1 1 +BOND 2HD1 CD1 1 +BOND 3HD1 CD1 1 +END + +RES LEU +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD1 C3 3 +ATOM CD2 C3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD1 1 +BOND CG CD2 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD1 CD1 1 +BOND 2HD1 CD1 1 +BOND 3HD1 CD1 1 +BOND 1HD2 CD2 1 +BOND 2HD2 CD2 1 +BOND 3HD2 CD2 1 +BOND HG CG 1 +END + +RES LYS +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C3 3 +ATOM CE C3 3 +ATOM NZ N3+ 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD CE 1 +BOND CE NZ 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD CD 1 +BOND 2HD CD 1 +BOND 1HG CG 1 +BOND 2HG CG 1 +BOND 1HE CE 1 +BOND 2HE CE 1 +BOND NZ 3HZ 1 +BOND NZ HZ3 1 +BOND NZ 2HZ 1 +BOND NZ HZ2 1 +BOND NZ 1HZ 1 +BOND NZ HZ1 1 +END + +RES LYZ +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM CD C3 3 +ATOM CE C3 3 +ATOM NZ N3+ 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD 1 +BOND CD CE 1 +BOND CE NZ 1 +BOND N H 1 +BOND NZ HZ2 1 +BOND NZ HZ1 1 +END + +RES MET +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG C3 3 +ATOM SD S3 3 +ATOM CE C3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG SD 1 +BOND SD CE 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HG CG 1 +BOND 2HG CG 1 +BOND 1HE CE 1 +BOND 2HE CE 1 +BOND 3HE CE 1 +END + +RES PHE +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG Car 2 +ATOM CD1 Car 2 +ATOM CD2 Car 2 +ATOM CE2 Car 2 +ATOM CZ Car 2 +ATOM CE1 Car 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD1 1 +BOND CG CD2 2 +BOND CD2 CE2 1 +BOND CE2 CZ 2 +BOND CZ CE1 1 +BOND CE1 CD1 2 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD CD1 1 +BOND 2HD CD2 1 +BOND 1HE CE1 1 +BOND 2HE CE2 1 +BOND HZ CZ 1 +END + +RES PRO +ATOM CA C3 3 +ATOM C Cac 2 +ATOM CB C3 3 +ATOM N Nam 2 +ATOM CD C3 3 +ATOM CG C3 3 +ATOM O O2 2 +BOND CA C 1 +BOND CA CB 1 +BOND CA N 1 +BOND N CD 1 +BOND CD CG 1 +BOND CG CB 1 +BOND C O 2 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HG CG 1 +BOND 2HG CG 1 +BOND 1HD CD 1 +BOND 2HD CD 1 +BOND HA CA 1 +BOND HN N 1 +END + +RES PSE +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM OG O3 3 +ATOM PD P3 3 +ATOM OE2 O- 3 +ATOM OE3 O- 3 +ATOM OE1 O- 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB OG 1 +BOND OG PD 1 +BOND PD OE2 1 +BOND PD OE3 1 +BOND PD OE1 1 +BOND N H 1 +END + +RES PSM +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM OG O3 3 +ATOM PD P3 3 +ATOM OE2 O- 3 +ATOM OE3 O- 3 +ATOM OE1 O- 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB OG 1 +BOND OG PD 1 +BOND PD OE2 1 +BOND PD OE3 1 +BOND PD OE1 1 +BOND N H 1 +BOND OE3 HE3 1 +END + +RES PTM +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG Car 2 +ATOM CD1 Car 2 +ATOM CD2 Car 2 +ATOM CE2 Car 2 +ATOM CZ Car 2 +ATOM OH O3 3 +ATOM CE1 Car 2 +ATOM PQ P3 3 +ATOM OI3 O- 3 +ATOM OI2 O- 3 +ATOM OI1 O- 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD1 2 +BOND CG CD2 1 +BOND CD2 CE2 2 +BOND CE2 CZ 1 +BOND CZ OH 1 +BOND CZ CE1 2 +BOND CE1 CD1 1 +BOND OH PQ 1 +BOND PQ OI3 1 +BOND PQ OI2 1 +BOND PQ OI1 1 +BOND N H 1 +BOND OI2 HI2 1 +END + +RES PTY +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG Car 2 +ATOM CD1 Car 2 +ATOM CD2 Car 2 +ATOM CE2 Car 2 +ATOM CZ Car 2 +ATOM OH O3 3 +ATOM CE1 Car 2 +ATOM PQ P3 3 +ATOM OI3 O- 3 +ATOM OI2 O- 3 +ATOM OI1 O- 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD1 2 +BOND CG CD2 1 +BOND CD2 CE2 2 +BOND CE2 CZ 1 +BOND CZ OH 1 +BOND CZ CE1 2 +BOND CE1 CD1 1 +BOND OH PQ 1 +BOND PQ OI3 1 +BOND PQ OI2 1 +BOND PQ OI1 1 +BOND N H 1 +END + +RES SER +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM OG O3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB OG 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND OG HG 1 +END + +RES THR +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG2 C3 3 +ATOM OG1 O3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG2 1 +BOND CB OG1 1 +BOND N H 1 +BOND HN N 1 +BOND N 1H 1 +BOND N 2H 1 +BOND N 3H 1 +BOND OG1 HG1 1 +BOND OG1 1HG 1 +BOND HB CB 1 +BOND HA CA 1 +BOND 1HG2 CG2 1 +BOND 2HG2 CG2 1 +BOND 3HG2 CG2 1 +END + +RES TRP +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG Car 2 +ATOM CD1 Car 2 +ATOM CD2 Car 2 +ATOM CE3 Car 2 +ATOM CE2 Car 2 +ATOM CZ2 Car 2 +ATOM NE1 Nar 2 +ATOM CH2 Car 2 +ATOM CZ3 Car 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD1 2 +BOND CG CD2 1 +BOND CD2 CE3 2 +BOND CD2 CE2 1 +BOND CE2 CZ2 2 +BOND CE2 NE1 1 +BOND NE1 CD1 1 +BOND CZ2 CH2 1 +BOND CH2 CZ3 2 +BOND CZ3 CE3 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD CD1 1 +BOND 1HE CE1 1 +BOND 2HZ CZ2 1 +BOND 3HZ CZ3 1 +BOND 3HE CE3 1 +BOND 2HH CH2 1 +BOND NE1 HE1 1 +BOND NE1 1HE 1 +END + +RES TYR +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG Car 2 +ATOM CD1 Car 2 +ATOM CD2 Car 2 +ATOM CE2 Car 2 +ATOM CZ Car 2 +ATOM OH O3 3 +ATOM CE1 Car 2 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG 1 +BOND CG CD1 2 +BOND CG CD2 1 +BOND CD2 CE2 2 +BOND CE2 CZ 1 +BOND CZ OH 1 +BOND CZ CE1 2 +BOND CE1 CD1 1 +BOND N H 1 +BOND OH HH 1 +BOND N HN 1 +BOND HA CA 1 +BOND 1HB CB 1 +BOND 2HB CB 1 +BOND 1HD CD1 1 +BOND 2HD CD2 1 +BOND 1HE CE1 1 +BOND 2HE CE2 1 +BOND HZ CZ 1 +END + +RES VAL +ATOM CA C3 3 +ATOM N Nam 2 +ATOM CB C3 3 +ATOM C Cac 2 +ATOM O O2 2 +ATOM CG2 C3 3 +ATOM CG1 C3 3 +BOND CA N 1 +BOND CA CB 1 +BOND CA C 1 +BOND C O 2 +BOND CB CG2 1 +BOND CB CG1 1 +BOND N H 1 +BOND N HN 1 +BOND HA CA 1 +BOND HB CB 1 +BOND 1HG1 CG1 1 +BOND 2HG1 CG1 1 +BOND 3HG1 CG1 1 +BOND 1HG2 CG2 1 +BOND 2HG2 CG2 1 +BOND 3HG2 CG2 1 +END + +RES TIP +ATOM OH2 O3 3 +BOND OH2 H1 1 +BOND OH2 H2 1 +END + +RES HOH +ATOM O O3 3 +ATOM 1H +ATOM 2H +BOND O 1H 1 +BOND O 2H 1 +END + +RES WAT +ATOM O O3 3 +ATOM H1 +ATOM H2 +BOND O H1 1 +BOND O H2 1 +END + +RES INH +ATOM P +ATOM O1P +ATOM O2P +ATOM O3P +ATOM O5 +ATOM C5 +ATOM C4 +ATOM O4 +ATOM C3 +ATOM C1 +ATOM O3 +ATOM C2 +ATOM O2 +ATOM N9 +ATOM C8 +ATOM N7 +ATOM C6 +ATOM O6 +ATOM N1 +ATOM N3 +BOND P O1P 2 +BOND P O2P 1 +BOND P O3P 1 +BOND P O5 1 +BOND O5 C5 1 +BOND C5 C4 1 +BOND C4 O4 1 +BOND C4 C3 1 +BOND O4 C1 1 +BOND C3 O3 1 +BOND C3 C2 1 +BOND O3 H1 1 +BOND C2 O2 1 +BOND C2 C1 1 +BOND O2 H2 1 +BOND C1 N9 1 +BOND N9 C8 1 +BOND N9 C4 1 +BOND C8 N7 2 +BOND N7 C5 1 +BOND C5 C6 1 +BOND C6 O6 2 +BOND C6 N1 1 +BOND N1 C2 1 +BOND N1 H3 1 +BOND C2 N3 2 +BOND N3 C4 1 +END + +RES UMP +ATOM N1 +ATOM C2 +ATOM C6 +ATOM C1 +ATOM N3 +ATOM O2 +ATOM C4 +ATOM C5 +ATOM O4 +ATOM C3 +ATOM O3 +ATOM O5 +ATOM P +ATOM O1P +ATOM O2P +ATOM O3P +BOND N1 C2 1 +BOND N1 C6 1 +BOND N1 C1 1 +BOND C2 N3 1 +BOND C2 O2 1 +BOND C2 H5 1 +BOND N3 C4 1 +BOND N3 H1 1 +BOND C4 C5 1 +BOND C4 O4 1 +BOND C4 H6 1 +BOND C5 C6 1 +BOND C5 H7 1 +BOND C5 H8 1 +BOND C6 H9 1 +BOND C6 H10 1 +BOND O2 H2 1 +BOND O4 H3 1 +BOND C1 C2 1 +BOND C1 O4 1 +BOND C1 H11 1 +BOND C2 C3 1 +BOND C2 H12 1 +BOND C2 H13 1 +BOND C3 C4 1 +BOND C3 O3 1 +BOND C3 H14 1 +BOND C4 H15 1 +BOND O3 H4 1 +BOND C5 O5 1 +BOND C5 H16 1 +BOND C5 H17 1 +BOND O5 P 1 +BOND P O1P 2 +BOND P O2P 2 +BOND P O3P 2 +END + +RES HED +ATOM C1 +ATOM O1 +ATOM C2 +ATOM S3 +ATOM S4 +ATOM C5 +ATOM C6 +ATOM O6 +BOND C1 O1 2 +BOND C1 C2 1 +BOND C2 S3 1 +BOND S3 S4 1 +BOND S4 C5 1 +BOND C5 C6 1 +BOND C6 O6 2 +END + +RES HEM +ATOM FE +ATOM NA +ATOM NB +ATOM NC +ATOM ND +ATOM CHA +ATOM C1A +ATOM C4D +ATOM CHB +ATOM C4A +ATOM C1B +ATOM CHC +ATOM C4B +ATOM C1C +ATOM CHD +ATOM C4C +ATOM C1D +ATOM C2A +ATOM C3A +ATOM CAA +ATOM CMA +ATOM CBA +ATOM CGA +ATOM O1A +ATOM O2A +ATOM C2B +ATOM C3B +ATOM CMB +ATOM CAB +ATOM CBB +ATOM C2C +ATOM C3C +ATOM CMC +ATOM CAC C3 3 +ATOM CBC +ATOM C2D +ATOM C3D +ATOM CMD +ATOM CAD +ATOM CBD +ATOM CGD +ATOM O1D +ATOM O2D +BOND FE NA 1 +BOND FE NB 1 +BOND FE NC 1 +BOND FE ND 1 +BOND CHA C1A 1 +BOND CHA C4D 1 +BOND CHB C4A 1 +BOND CHB C1B 1 +BOND CHC C4B 1 +BOND CHC C1C 1 +BOND CHD C4C 1 +BOND CHD C1D 1 +BOND NA C1A 1 +BOND NA C4A 1 +BOND C1A C2A 1 +BOND C2A C3A 1 +BOND C2A CAA 1 +BOND C3A C4A 1 +BOND C3A CMA 1 +BOND CAA CBA 1 +BOND CBA CGA 1 +BOND CGA O1A 2 +BOND CGA O2A 1 +BOND NB C1B 1 +BOND NB C4B 1 +BOND C1B C2B 1 +BOND C2B C3B 1 +BOND C2B CMB 1 +BOND C3B C4B 1 +BOND C3B CAB 1 +BOND CAB CBB 1 +BOND NC C1C 1 +BOND NC C4C 1 +BOND C1C C2C 1 +BOND C2C C3C 1 +BOND C2C CMC 1 +BOND C3C C4C 1 +BOND C3C CAC 1 +BOND CAC CBC 1 +BOND ND C1D 1 +BOND ND C4D 1 +BOND C1D C2D 1 +BOND C2D C3D 1 +BOND C2D CMD 1 +BOND C3D C4D 1 +BOND C3D CAD 1 +BOND CAD CBD 1 +BOND CBD CGD 1 +BOND CGD O1D 2 +BOND CGD O2D 1 +END