Mercurial > repos > marcel > caddsuite_mac10_6
diff CADDSuite-1.0.1/data/fragments/ALA.db @ 5:e30a41af9d2b
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author | marcel |
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date | Tue, 15 Nov 2011 10:53:16 -0500 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/CADDSuite-1.0.1/data/fragments/ALA.db Tue Nov 15 10:53:16 2011 -0500 @@ -0,0 +1,82 @@ +<node>ALA + <node>Names + <node>Alanine</node> + <node>Alanin</node> + <node>Ala</node> + <node>A</node> + </node> + <node>Atoms + <node>N<value>N 0.09952427 1.425946 -0.01392276</value></node> + <node>3H<value>H 0.9122966 2.021833 0.09543685</value></node> + <node>CA<value>C -0.6343572 1.904422 -1.199327</value></node> + <node>HA<value>H -0.06613517 1.608824 -2.082189</value></node> + <node>C<value>C -0.7061328 3.434369 -1.195026</value></node> + <node>O<value>O 0.2770563 4.020259 -0.6877273</value></node> + <node>CB<value>C -2.018631 1.250585 -1.273356</value></node> + <node>1HB<value>H -2.525042 1.535779 -2.196084</value></node> + <node>2HB<value>H -1.909473 0.1656088 -1.256012</value></node> + <node>3HB<value>H -2.621985 1.560564 -0.4192078</value></node> + <node>OXT<value>O -1.554726 3.968913 -1.942107</value></node> + <node>1H<value>H -0.4859746 1.514033 0.8043322</value></node> + <node>2H<value>H 0.3756785 0.4622824 -0.137128</value></node> + </node> + <node>Bonds + <node>5<value>3H N s</value></node> + <node>6<value>CA N s</value></node> + <node>10<value>HA CA s</value></node> + <node>11<value>C CA s</value></node> + <node>14<value>O C d</value></node> + <node>15<value>CB CA s</value></node> + <node>19<value>1HB CB s</value></node> + <node>20<value>2HB CB s</value></node> + <node>21<value>3HB CB s</value></node> + <node>22<value>OXT C s</value></node> + <node>23<value>1H N s</value></node> + <node>24<value>2H N s</value></node> + </node> + <node>Connections + <node>N-term<value>N C-term s 1.33 0.5</value></node> + <node>C-term<value>C N-term s 1.33 0.5</value></node> + </node> + <node>Properties + <node>AMINO_ACID</node> + </node> + <node>Variants + <node>Default + <node>Delete + <node>OXT<value></value></node> + <node>1H<value></value></node> + <node>2H<value></value></node> + </node> + <node>Rename + <node>3H<value>H</value></node> + </node> + </node> + <node>ALA-M + <node>Properties + <node>C_TERMINAL</node> + <node>N_TERMINAL</node> + </node> + </node> + <node>ALA-C + <node>Delete + <node>1H<value></value></node> + <node>2H<value></value></node> + </node> + <node>Rename + <node>3H<value>H</value></node> + </node> + <node>Properties + <node>C_TERMINAL</node> + </node> + </node> + <node>ALA-N + <node>Delete + <node>OXT<value></value></node> + </node> + <node>Properties + <node>N_TERMINAL</node> + </node> + </node> + </node> +</node>