diff CADDSuite-1.6/data/OpenBabel/superatom.txt @ 10:eda78e0f5df6 draft default tip

Deleted selected files
author marcel
date Sun, 30 Nov 2014 03:46:08 -0500
parents 488032d372e1
children
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--- a/CADDSuite-1.6/data/OpenBabel/superatom.txt	Sat Dec 15 13:16:40 2012 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,114 +0,0 @@
-# Translations of superatom labels to SMILES.
-# First atom of SMILES string should be the one connected to the rest of
-# the molecule.
-# Empty lines and lines starting with # are ignored.
-# Originally from http://cactus.nci.nih.gov/osra/
-# The left-aligned form is the one recognized in MDL alias lines;
-# the right-aligned form may be used in 2D depiction.
-# The whole list is used to look up alias names;
-# only the part up to a line starting with ## is used to generate aliases.
-# and here the largest fragments should be first; 
-#left    right    SMILES		color
-CO2Et    EtO2C    C(=O)OCC
-COOEt    EtOOC    C(=O)OCC
-OiBu     iBuO     OCC(C)C
-tBu      tBu      C(C)(C)C
-nBu      nBu      CCCC
-iPr      iPr      C(C)C
-nPr      nPr      CCC
-Et       Et       CC
-NCF3     F3CN     NC(F)(F)F
-CF3      F3C      C(F)(F)F
-CCl3	 Cl3C     C(Cl)(Cl)Cl
-CN       NC       C#N
-NC       CN       [N+]#[C-]
-N(OH)CH3 CH3(OH)N N(O)C
-NO2      O2N      N(=O)=O
-NO       ON       N=O
-SO3H     HO3S     S(=O)(=O)O
-COOH     HOOC     C(=O)O		blue
-OEt      EtO      OCC
-OAc      AcO      OC(=O)C
-NHAc     AcNH     NC(=O)C
-Ac       Ac       C(=O)C
-CHO      OHC      C=O
-NMe      MeN      NC
-SMe      MeS      SC
-OMe      MeO      OC
-COO-     -OOC     C(=O)[O-]
-## Only entries above this line are used to *generate* aliases.
-Ph       Ph       c1ccccc1
-OR       RO       O*
-OBz      BzO      OCc1ccccc1
-THPO     THPO     O[C@@H]1OCCCC1
-NOH      HON      NO 
-CO2Me    MeO2C    C(=O)OC
-COOMe    MeOOC    C(=O)OC
-SO2Me    MeO2S    S(=O)(=O)C
-NMe2     Me2N     N(C)C
-CO2R     RO2C     C(=O)O*
-COOR     ROOC     C(=O)O*
-NHZ      ZNH      NC(=O)OCC1=CC=CC=C1
-CH2OH    HOCH2    CO
-CH2NH2   H2NCH2   CN
-Me       Me       C
-OBn      BnO      OCC1=CC=CC=C1
-NHAm     AmNH     NCCCCC
-OAm      AmO      OCCCCC
-CO2Am    AmO2C    C(=O)OCCCCC
-COOAm    AmOOC    C(=O)OCCCCC
-SAm      AmS      SCCCCC
-NHBn     BnNH     NCC1=CC=CC=C1
-CO2Bn    BnO2C    C(=O)OCC1=CC=CC=C1
-SnBu3    Bu3Sn    [Sn](CCCC)(CCCC)CCCC
-NHBu     BuNH     NCCCC
-OBu      BuO      OCCCC
-CO2Bu    BuO2C    C(=O)OCCCC
-COOBu    BuOOC    C(=O)OCCCC
-SBu      BuS      SCCCC
-CBr3	 Br3C     C(Br)(Br)Br
-NHCbz    CbzNH    NC(=O)OCC1=CC=CC=C1
-SO2Cl    ClSO2    S(Cl)(=O)=O
-COBr     BrCO     C(=O)Br
-COBu     BuCO     C(=O)CCCC
-COCF3    F3CCO    C(=O)C(F)(F)F
-COCl     ClCO     C(=O)Cl
-COCO     COCO     C(=O)C=O
-COEt     EtCO     C(=O)CC
-COF      FCO      C(=O)F
-COMe     MeCO     C(=O)C
-CONEt2   Et2NCO   C(=O)(CC)NCC
-CONH2    H2NCO    C(=O)N
-CONHEt   EtHNCO   C(=O)NCC
-CONHMe   MeHNCO   C(=O)NC
-CONMe2   Me2NCO   C(=O)(C)NC
-COSH     HSOC     C(=O)S
-NEt2     Et2N     N(CC)CC
-NEt3     Et3N     N(CC)(CC)CC
-NHEt     EtNH     NCC
-SO2NH2   H2NSO2   S(=O)(N)=O
-NHOH     HONH     ON
-NMe2     Me2N     N(C)C
-OMs      MsO      CS(O)(=O)=O
-OCN      NCO      N=C=O
-SCN      NCS      N=C=S
-NHAm     AmHN     NCCCCC
-NHBn     BuHN     NCC1=CC=CC=C1
-NHBu     BuHN     NCCCC
-NHEt     EtHB     NCC
-NHOH     HOHN     NO
-NHPr     PrHN     NCCC
-NO       ON       N=O
-POEt2    EtO2P    P(OCC)OCC
-POEt3    EtO3P    P(OCC)(OCC)OCC
-POOEt2   Et2OOP   P(=O)(OCC)OCC
-PrNH     HNPr     CCCN
-SEt      CCS      SCC
-#Aliases from samples provided with InChI
-CH       HC       [CH]
-CH-      HC-      [CH-]
-D        D        [2H]
-ND2      D2N      [N]([2H])[2H]
-DS       SD       [S][2H]  
-CH3      H3C      C
-C2H5     C2H5     CC
\ No newline at end of file