Mercurial > repos > marcel > caddsuite_mac10_6
diff CADDSuite-1.6/data/OpenBabel/superatom.txt @ 10:eda78e0f5df6 draft default tip
Deleted selected files
author | marcel |
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date | Sun, 30 Nov 2014 03:46:08 -0500 |
parents | 488032d372e1 |
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--- a/CADDSuite-1.6/data/OpenBabel/superatom.txt Sat Dec 15 13:16:40 2012 -0500 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,114 +0,0 @@ -# Translations of superatom labels to SMILES. -# First atom of SMILES string should be the one connected to the rest of -# the molecule. -# Empty lines and lines starting with # are ignored. -# Originally from http://cactus.nci.nih.gov/osra/ -# The left-aligned form is the one recognized in MDL alias lines; -# the right-aligned form may be used in 2D depiction. -# The whole list is used to look up alias names; -# only the part up to a line starting with ## is used to generate aliases. -# and here the largest fragments should be first; -#left right SMILES color -CO2Et EtO2C C(=O)OCC -COOEt EtOOC C(=O)OCC -OiBu iBuO OCC(C)C -tBu tBu C(C)(C)C -nBu nBu CCCC -iPr iPr C(C)C -nPr nPr CCC -Et Et CC -NCF3 F3CN NC(F)(F)F -CF3 F3C C(F)(F)F -CCl3 Cl3C C(Cl)(Cl)Cl -CN NC C#N -NC CN [N+]#[C-] -N(OH)CH3 CH3(OH)N N(O)C -NO2 O2N N(=O)=O -NO ON N=O -SO3H HO3S S(=O)(=O)O -COOH HOOC C(=O)O blue -OEt EtO OCC -OAc AcO OC(=O)C -NHAc AcNH NC(=O)C -Ac Ac C(=O)C -CHO OHC C=O -NMe MeN NC -SMe MeS SC -OMe MeO OC -COO- -OOC C(=O)[O-] -## Only entries above this line are used to *generate* aliases. -Ph Ph c1ccccc1 -OR RO O* -OBz BzO OCc1ccccc1 -THPO THPO O[C@@H]1OCCCC1 -NOH HON NO -CO2Me MeO2C C(=O)OC -COOMe MeOOC C(=O)OC -SO2Me MeO2S S(=O)(=O)C -NMe2 Me2N N(C)C -CO2R RO2C C(=O)O* -COOR ROOC C(=O)O* -NHZ ZNH NC(=O)OCC1=CC=CC=C1 -CH2OH HOCH2 CO -CH2NH2 H2NCH2 CN -Me Me C -OBn BnO OCC1=CC=CC=C1 -NHAm AmNH NCCCCC -OAm AmO OCCCCC -CO2Am AmO2C C(=O)OCCCCC -COOAm AmOOC C(=O)OCCCCC -SAm AmS SCCCCC -NHBn BnNH NCC1=CC=CC=C1 -CO2Bn BnO2C C(=O)OCC1=CC=CC=C1 -SnBu3 Bu3Sn [Sn](CCCC)(CCCC)CCCC -NHBu BuNH NCCCC -OBu BuO OCCCC -CO2Bu BuO2C C(=O)OCCCC -COOBu BuOOC C(=O)OCCCC -SBu BuS SCCCC -CBr3 Br3C C(Br)(Br)Br -NHCbz CbzNH NC(=O)OCC1=CC=CC=C1 -SO2Cl ClSO2 S(Cl)(=O)=O -COBr BrCO C(=O)Br -COBu BuCO C(=O)CCCC -COCF3 F3CCO C(=O)C(F)(F)F -COCl ClCO C(=O)Cl -COCO COCO C(=O)C=O -COEt EtCO C(=O)CC -COF FCO C(=O)F -COMe MeCO C(=O)C -CONEt2 Et2NCO C(=O)(CC)NCC -CONH2 H2NCO C(=O)N -CONHEt EtHNCO C(=O)NCC -CONHMe MeHNCO C(=O)NC -CONMe2 Me2NCO C(=O)(C)NC -COSH HSOC C(=O)S -NEt2 Et2N N(CC)CC -NEt3 Et3N N(CC)(CC)CC -NHEt EtNH NCC -SO2NH2 H2NSO2 S(=O)(N)=O -NHOH HONH ON -NMe2 Me2N N(C)C -OMs MsO CS(O)(=O)=O -OCN NCO N=C=O -SCN NCS N=C=S -NHAm AmHN NCCCCC -NHBn BuHN NCC1=CC=CC=C1 -NHBu BuHN NCCCC -NHEt EtHB NCC -NHOH HOHN NO -NHPr PrHN NCCC -NO ON N=O -POEt2 EtO2P P(OCC)OCC -POEt3 EtO3P P(OCC)(OCC)OCC -POOEt2 Et2OOP P(=O)(OCC)OCC -PrNH HNPr CCCN -SEt CCS SCC -#Aliases from samples provided with InChI -CH HC [CH] -CH- HC- [CH-] -D D [2H] -ND2 D2N [N]([2H])[2H] -DS SD [S][2H] -CH3 H3C C -C2H5 C2H5 CC \ No newline at end of file