annotate QSAR_workflow.ga @ 1:e047a2629ecf

Uploaded
author marcel
date Thu, 19 Jan 2012 11:33:05 -0500
parents b17805005cc8
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
0
b17805005cc8 Uploaded
marcel
parents:
diff changeset
1 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
2 "a_galaxy_workflow": "true",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
3 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
4 "format-version": "0.1",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
5 "name": "QSAR workflow",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
6 "steps": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
7 "0": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
8 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
9 "id": 0,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
10 "input_connections": {},
b17805005cc8 Uploaded
marcel
parents:
diff changeset
11 "inputs": [
b17805005cc8 Uploaded
marcel
parents:
diff changeset
12 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
13 "description": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
14 "name": "Training data set"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
15 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
16 ],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
17 "name": "Input dataset",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
18 "outputs": [],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
19 "position": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
20 "left": 299,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
21 "top": 309.5
b17805005cc8 Uploaded
marcel
parents:
diff changeset
22 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
23 "tool_errors": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
24 "tool_id": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
25 "tool_state": "{\"name\": \"Training data set\"}",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
26 "tool_version": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
27 "type": "data_input",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
28 "user_outputs": []
b17805005cc8 Uploaded
marcel
parents:
diff changeset
29 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
30 "1": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
31 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
32 "id": 1,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
33 "input_connections": {},
b17805005cc8 Uploaded
marcel
parents:
diff changeset
34 "inputs": [
b17805005cc8 Uploaded
marcel
parents:
diff changeset
35 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
36 "description": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
37 "name": "Input Dataset"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
38 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
39 ],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
40 "name": "Input dataset",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
41 "outputs": [],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
42 "position": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
43 "left": 298.5,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
44 "top": 448
b17805005cc8 Uploaded
marcel
parents:
diff changeset
45 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
46 "tool_errors": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
47 "tool_id": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
48 "tool_state": "{\"name\": \"Input Dataset\"}",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
49 "tool_version": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
50 "type": "data_input",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
51 "user_outputs": []
b17805005cc8 Uploaded
marcel
parents:
diff changeset
52 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
53 "2": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
54 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
55 "id": 2,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
56 "input_connections": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
57 "i": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
58 "id": 0,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
59 "output_name": "output"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
60 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
61 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
62 "inputs": [],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
63 "name": "InputReader",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
64 "outputs": [
b17805005cc8 Uploaded
marcel
parents:
diff changeset
65 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
66 "name": "o",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
67 "type": "dat"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
68 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
69 ],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
70 "position": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
71 "left": 518,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
72 "top": 265.5
b17805005cc8 Uploaded
marcel
parents:
diff changeset
73 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
74 "tool_errors": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
75 "tool_id": "inputreader",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
76 "tool_state": "{\"__page__\": 0, \"csv_sep\": \"\\\"\\\"\", \"sdp\": \"\\\"True\\\"\", \"i\": \"null\", \"csv_dl\": \"\\\"False\\\"\", \"no_cr\": \"\\\"False\\\"\", \"no_cd\": \"\\\"False\\\"\", \"csv_nr\": \"\\\"\\\"\", \"act\": \"\\\"ACTIVITY\\\"\", \"csv_cl\": \"\\\"False\\\"\", \"csv\": \"null\"}",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
77 "tool_version": "1.1",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
78 "type": "tool",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
79 "user_outputs": []
b17805005cc8 Uploaded
marcel
parents:
diff changeset
80 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
81 "3": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
82 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
83 "id": 3,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
84 "input_connections": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
85 "i1": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
86 "id": 0,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
87 "output_name": "output"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
88 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
89 "i2": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
90 "id": 1,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
91 "output_name": "output"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
92 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
93 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
94 "inputs": [],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
95 "name": "SimilarityAnalyzer",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
96 "outputs": [
b17805005cc8 Uploaded
marcel
parents:
diff changeset
97 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
98 "name": "o",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
99 "type": "png"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
100 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
101 ],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
102 "position": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
103 "left": 526.5,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
104 "top": 496
b17805005cc8 Uploaded
marcel
parents:
diff changeset
105 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
106 "tool_errors": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
107 "tool_id": "similarityanalyzer",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
108 "tool_state": "{\"i1\": \"null\", \"__page__\": 0, \"i2\": \"null\", \"title\": \"\\\"None\\\"\"}",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
109 "tool_version": "0.9",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
110 "type": "tool",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
111 "user_outputs": []
b17805005cc8 Uploaded
marcel
parents:
diff changeset
112 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
113 "4": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
114 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
115 "id": 4,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
116 "input_connections": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
117 "i": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
118 "id": 2,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
119 "output_name": "o"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
120 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
121 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
122 "inputs": [],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
123 "name": "AutoModel",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
124 "outputs": [
b17805005cc8 Uploaded
marcel
parents:
diff changeset
125 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
126 "name": "o",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
127 "type": "mod"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
128 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
129 ],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
130 "position": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
131 "left": 818,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
132 "top": 287.5
b17805005cc8 Uploaded
marcel
parents:
diff changeset
133 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
134 "tool_errors": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
135 "tool_id": "automodel",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
136 "tool_state": "{\"i\": \"null\", \"__page__\": 0, \"min_quality\": \"\\\"0.3\\\"\"}",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
137 "tool_version": "1.1",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
138 "type": "tool",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
139 "user_outputs": []
b17805005cc8 Uploaded
marcel
parents:
diff changeset
140 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
141 "5": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
142 "annotation": "",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
143 "id": 5,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
144 "input_connections": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
145 "i": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
146 "id": 1,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
147 "output_name": "output"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
148 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
149 "mod": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
150 "id": 4,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
151 "output_name": "o"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
152 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
153 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
154 "inputs": [],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
155 "name": "MolPredictor",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
156 "outputs": [
b17805005cc8 Uploaded
marcel
parents:
diff changeset
157 {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
158 "name": "o",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
159 "type": "sdf"
b17805005cc8 Uploaded
marcel
parents:
diff changeset
160 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
161 ],
b17805005cc8 Uploaded
marcel
parents:
diff changeset
162 "position": {
b17805005cc8 Uploaded
marcel
parents:
diff changeset
163 "left": 729.5,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
164 "top": 413.5
b17805005cc8 Uploaded
marcel
parents:
diff changeset
165 },
b17805005cc8 Uploaded
marcel
parents:
diff changeset
166 "tool_errors": null,
b17805005cc8 Uploaded
marcel
parents:
diff changeset
167 "tool_id": "molpredictor",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
168 "tool_state": "{\"__page__\": 0, \"csv_sep\": \"\\\"\\\"\", \"sdp\": \"\\\"True\\\"\", \"i\": \"null\", \"csv_dl\": \"\\\"False\\\"\", \"csv_nr\": \"\\\"\\\"\", \"csv_cl\": \"\\\"False\\\"\", \"rm\": \"\\\"False\\\"\", \"csv\": \"null\", \"mod\": \"null\"}",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
169 "tool_version": "1.1",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
170 "type": "tool",
b17805005cc8 Uploaded
marcel
parents:
diff changeset
171 "user_outputs": []
b17805005cc8 Uploaded
marcel
parents:
diff changeset
172 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
173 }
b17805005cc8 Uploaded
marcel
parents:
diff changeset
174 }