Mercurial > repos > marie-tremblay-metatoul > 2dnmrannotation
diff viridis.R @ 2:dff7bde22102 draft
"planemo upload for repository https://github.com/workflow4metabolomics/tools-metabolomics commit b3abcb650e9b38458aa0ac5f7d838811d982ff65"
author | workflow4metabolomics |
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date | Tue, 04 Feb 2020 10:59:26 -0500 |
parents | |
children | 546c7ccd2ed4 |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/viridis.R Tue Feb 04 10:59:26 2020 -0500 @@ -0,0 +1,28 @@ +viridis <- function (n, alpha = 1, begin = 0, end = 1, direction = 1, option = "D") +{ + if (begin < 0 | begin > 1 | end < 0 | end > 1) { + stop("begin and end must be in [0,1]") + } + if (abs(direction) != 1) { + stop("direction must be 1 or -1") + } + if (direction == -1) { + tmp <- begin + begin <- end + end <- tmp + } + option <- switch(EXPR = option, A = "A", magma = "A", + B = "B", inferno = "B", C = "C", plasma = "C", + D = "D", viridis = "D", E = "E", cividis = "E", + { + warning(paste0("Option '", option, "' does not exist. Defaulting to 'viridis'.")) + "D" + }) + map <- viridisLite::viridis.map[viridisLite::viridis.map$opt == + option, ] + map_cols <- grDevices::rgb(map$R, map$G, map$B) + fn_cols <- grDevices::colorRamp(map_cols, space = "Lab", + interpolate = "spline") + cols <- fn_cols(seq(begin, end, length.out = n))/255 + grDevices::rgb(cols[, 1], cols[, 2], cols[, 3], alpha = alpha) +} \ No newline at end of file