Mercurial > repos > marpiech > norwich_tools_dock
annotate tools/rdock/bin/make_grid.csh @ 5:a2f9c8a46a4b draft default tip
planemo upload commit b9501ecca66b6a66c8cb87b945ad5f95181d7790-dirty
| author | marpiech |
|---|---|
| date | Thu, 06 Oct 2016 07:09:26 -0400 |
| parents | 75f2b4087722 |
| children |
| rev | line source |
|---|---|
|
0
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
1 #!/bin/csh -f |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
2 # Creates vdW grids for all receptor prm files listed on command line |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
3 # |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
4 set gridstep = 0.3 |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
5 set border = 1.0 |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
6 |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
7 foreach grid ('vdw1' 'vdw5') |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
8 foreach file ($argv) |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
9 $RBT_ROOT/bin/rbcalcgrid -r${file} -pcalcgrid_${grid}.prm -o_${grid}.grd -g${gridstep} -b${border} |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
10 end |
|
75f2b4087722
planemo upload commit 781926e52355f7805db8d9a4ccafeff397b19aa4-dirty
marpiech
parents:
diff
changeset
|
11 end |
