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comparison fastq_dump.xml @ 25:393a04ec0fa9

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Update tool requirement versions.
author Matt Shirley <mdshw5@gmail.com>
date Mon, 30 Mar 2015 21:57:40 -0400
parents eb55ff614fed
children 8be4f23d1018
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24:22d9fe442c50 25:393a04ec0fa9
110 </outputs> 110 </outputs>
111 <stdio> 111 <stdio>
112 <exit_code range="127" level="fatal" description="Could not locate fastq-dump binary"/> 112 <exit_code range="127" level="fatal" description="Could not locate fastq-dump binary"/>
113 </stdio> 113 </stdio>
114 <requirements> 114 <requirements>
115 <requirement type="package" version="2.3.4-2">sra_toolkit</requirement> 115 <requirement type="package" version="2.4.5">sra_toolkit</requirement>
116 </requirements> 116 </requirements>
117 <help> 117 <help>
118 This tool extracts reads from SRA archives using fastq-dump. 118 This tool extracts reads from SRA archives using fastq-dump.
119 Browse the NCBI SRA for SRR accessions at http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=studies. 119 Browse the NCBI SRA for SRR accessions at http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=studies.
120 The fastq-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software. 120 The fastq-dump program is developed at NCBI, and is available at: http://www.ncbi.nlm.nih.gov/Traces/sra/sra.cgi?view=software.