Mercurial > repos > matt-shirley > ncbi_sra_toolkit

diff tool_dependencies.xml @ 22:4102c1600aa0

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blargh
author Matt Shirley <mdshw5@gmail.com>
date Mon, 30 Mar 2015 21:13:09 -0400
parents 847db227d9ce
children b94593ba997b
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--- a/tool_dependencies.xml	Mon Mar 30 21:11:03 2015 -0400
+++ b/tool_dependencies.xml	Mon Mar 30 21:13:09 2015 -0400
@@ -11,7 +11,7 @@
             git clone https://github.com/mdshw5/ncbi-vdb.git
             git clone https://github.com/mdshw5/ngs.git
             LD_LIBRARY_PATH=LD_LIBRARY_PATH:$INSTALL_DIR/lib64:$INSTALL_DIR/lib
-            cd $INSTALL_DIR/ncbi-vdb
+            cd $INSTALL_DIR/src/ncbi-vdb
             ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build
             make -j2
             make install
@@ -19,7 +19,7 @@
             ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build
             make -j2
             make install
-            cd $INSTALL_DIR/sra-tools
+            cd $INSTALL_DIR/src/sra-tools
             ./configure --prefix=$INSTALL_DIR --build-prefix=$INSTALL_DIR/build --with-ncbi-vdb-build=$INSTALL_DIR/build --with-ncbi-vdb-sources=$INSTALL_DIR/src/ncbi-vdb --with-ngs-sdk-prefix=$INSTALL_DIR
             make -j2
             make install