# HG changeset patch
# User Matt Shirley <mdshw5@gmail.com>
# Date 1406312836 14400
# Node ID eb55ff614fed84f92e74f617ef5c75d57e1b0d0a
# Parent  558a88cd49e4754a3a49a7946c51f9175024690f
Fixed bug affecting --split-spot option.

diff -r 558a88cd49e4 -r eb55ff614fed fastq_dump.xml
--- a/fastq_dump.xml	Thu Mar 13 16:11:04 2014 -0400
+++ b/fastq_dump.xml	Fri Jul 25 14:27:16 2014 -0400
@@ -1,4 +1,4 @@
-<tool id="fastq_dump" name="Extract reads" version="1.1.1">
+<tool id="fastq_dump" name="Extract reads" version="1.1.2">
   <description> from NCBI SRA.</description>
   <command>
     fastq-dump --log-level fatal
@@ -9,7 +9,7 @@
     #end if
     --defline-seq '@\$sn[_\$rn]/\$ri'
     --stdout
-    #if $split == "yes":
+    #if str( $split ) == "yes":
       --split-spot
     #end if
     #if str( $alignments ) == "aligned":