--- a/sra.py	Sun Nov 18 17:12:24 2012 -0500
+++ /dev/null	Thu Jan 01 00:00:00 1970 +0000
@@ -1,46 +0,0 @@
-"""
-Sra class
-"""
-
-import galaxy.datatypes.binary
-from galaxy.datatypes.binary import Binary
-import data, logging, binascii
-from galaxy.datatypes.metadata import MetadataElement
-from galaxy.datatypes import metadata
-from galaxy.datatypes.sniff import *
-from galaxy import eggs
-import pkg_resources
-pkg_resources.require( "bx-python" )
-import os, subprocess, tempfile
-import struct
-
-class Sra( Binary ):
-    """ Sequence Read Archive (SRA) """
-    file_ext = "sra"
-
-    def __init__( self, **kwd ):
-        Binary.__init__( self, **kwd )
-    def sniff( self, filename ):
-        # The first 8 bytes of any NCBI sra file is 'NCIB.sra', and the file is binary. EBI and DDBJ files may differ. For details
-        # about the format, see http://www.ncbi.nlm.nih.gov/books/n/helpsra/SRA_Overview_BK/#SRA_Overview_BK.4_SRA_Data_Structure
-        try:
-            header = open( filename ).read(8)
-            if binascii.b2a_hex( header ) == binascii.hexlify( 'NCBI.sra' ):
-                return True
-            return False
-        except:
-            return False
-    def set_peek( self, dataset, is_multi_byte=False ):
-        if not dataset.dataset.purged:
-            dataset.peek  = "Binary sra file" 
-            dataset.blurb = data.nice_size( dataset.get_size() )
-        else:
-            dataset.peek = 'file does not exist'
-            dataset.blurb = 'file purged from disk'
-    def display_peek( self, dataset ):
-        try:
-            return dataset.peek
-        except:
-            return "Binary sra file (%s)" % ( data.nice_size( dataset.get_size() ) )
-
-Binary.register_sniffable_binary_format("sra", "sra", Sra)