# HG changeset patch
# User Matthew Shirley <mdshw5@gmail.com>
# Date 1352916812 18000
# Node ID 8ce70ee5f33570504a85ea9078483008228a3af8
# Parent  01dec86115428450dfd1c1e5c633aa911018a36d
Updated wrapper script. First version that should work properly.

diff -r 01dec8611542 -r 8ce70ee5f335 sra_fetch.xml
--- a/sra_fetch.xml	Wed Nov 14 13:05:14 2012 -0500
+++ b/sra_fetch.xml	Wed Nov 14 13:13:32 2012 -0500
@@ -1,2 +1,16 @@
 <tool id="sra_fetch" name="Fetch SRA" version="1.0.0">
+  <description> by accession from NCBI SRA.</description>
+  <command interpreter="python">sra_fetch.py $accession > $output</command>
+  <inputs>
+    <param name="accession" size="13" type="text" value="SRR000001" label="SRA run accession"/>
+  </inputs>
+  <outputs>
+    <data format="sra" name="output"/>
+  </outputs>
+  <requirements>
+    <requirement type="python">sra_fetch.py</requirement>
+  </requirements>
+  <help>
+    This tool fetches SRA archives from NCBI over FTP using the python ftplib.
+  </help>
 </tool>