Mercurial > repos > matt-shirley > sra_tools

comparison sra_fetch.xml @ 1:75d914fa5711 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Moving repository to testtoolshed for now.
author matt-shirley
date Tue, 27 Nov 2012 13:43:03 -0500
parents cdcc400dcafc
children
comparison
equal deleted inserted replaced
0:cdcc400dcafc 1:75d914fa5711
1 <tool id="sra_fetch" name="Fetch SRA" version="1.0.0">
2 <description> by accession from NCBI SRA.</description>
3 <command interpreter="python">sra_fetch.py '$accession' '$output'</command>
4 <inputs>
5 <param name="accession" size="13" type="text" value="SRR000001" label="SRA run accession"/>
6 </inputs>
7 <outputs>
8 <data format="sra" name="output" label="Fetch ${accession.value}"/>
9 </outputs>
10 <requirements>
11 <requirement type="python">sra_fetch.py</requirement>
12 </requirements>
13 <help>
14 This tool fetches SRA archives from NCBI over FTP using the python ftplib.
15 </help>
16 </tool>