Mercurial > repos > mbernt > longorf

diff test-data/test_output.tab @ 1:1c4b24e9bb16 draft

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planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/blob/master/tools/longorf/ commit 5be33ea99532ab3abb000564af4c63c81c4ccd87
author mbernt
date Mon, 16 Jul 2018 11:01:52 -0400
parents ec898924d8c7
children
line wrap: on
line diff
--- a/test-data/test_output.tab	Wed Jun 20 11:02:06 2018 -0400
+++ b/test-data/test_output.tab	Mon Jul 16 11:01:52 2018 -0400
@@ -1,60 +1,46 @@
-seqID	start	end	length	orientation	longest
-14520830-14521117(-)	2	37	35	Forward	n
-14520830-14521117(-)	3	47	44	Forward	n
-14520830-14521117(-)	41	94	53	Forward	n
-14520830-14521117(-)	63	152	89	Forward	n
-14520830-14521117(-)	146	175	29	Forward	n
-14520830-14521117(-)	156	200	44	Forward	n
-14520830-14521117(-)	1	240	239	Forward	n
-14520830-14521117(-)	179	325	146	Forward	n
-14520830-14521117(-)	204	335	131	Forward	n
-14520830-14521117(-)	329	382	53	Forward	n
-14520830-14521117(-)	351	440	89	Forward	n
-14520830-14521117(-)	434	463	29	Forward	n
-14520830-14521117(-)	444	488	44	Forward	n
-14520830-14521117(-)	244	528	284	Forward	n
-14520830-14521117(-)	467	574	107	Forward	n
-14520830-14521117(-)	492	575	83	Forward	n
-14520830-14521117(-)	532	576	44	Forward	n
-14520830-14521117(-)	575	543	32	Forward	n
-14520830-14521117(-)	574	524	50	Forward	n
-14520830-14521117(-)	576	466	110	Forward	n
-14520830-14521117(-)	520	458	62	Forward	n
-14520830-14521117(-)	454	401	53	Forward	n
-14520830-14521117(-)	397	359	38	Forward	n
-14520830-14521117(-)	355	311	44	Forward	n
-14520830-14521117(-)	539	255	284	Forward	n
-14520830-14521117(-)	307	236	71	Forward	n
-14520830-14521117(-)	462	178	284	Forward	y
-14520830-14521117(-)	232	170	62	Forward	n
-14520830-14521117(-)	166	113	53	Forward	n
-14520830-14521117(-)	109	71	38	Forward	n
-14520830-14521117(-)	67	23	44	Forward	n
-14520830-14521117(-)	251	3	248	Forward	n
-14520830-14521117(-)	174	1	173	Forward	n
-103089310-103089560(-)	2	37	35	Reverse	n
-103089310-103089560(-)	24	92	68	Reverse	n
-103089310-103089560(-)	13	117	104	Reverse	n
-103089310-103089560(-)	138	167	29	Reverse	n
-103089310-103089560(-)	180	260	80	Reverse	n
-103089310-103089560(-)	41	271	230	Reverse	n
-103089310-103089560(-)	127	288	161	Reverse	n
-103089310-103089560(-)	275	343	68	Reverse	n
-103089310-103089560(-)	264	368	104	Reverse	n
-103089310-103089560(-)	389	418	29	Reverse	n
-103089310-103089560(-)	378	500	122	Reverse	n
-103089310-103089560(-)	292	501	209	Reverse	n
-103089310-103089560(-)	431	502	71	Reverse	n
-103089310-103089560(-)	500	447	53	Reverse	n
-103089310-103089560(-)	480	436	44	Reverse	n
-103089310-103089560(-)	502	383	119	Reverse	n
-103089310-103089560(-)	426	361	65	Reverse	n
-103089310-103089560(-)	357	289	68	Reverse	n
-103089310-103089560(-)	379	233	146	Reverse	n
-103089310-103089560(-)	279	196	83	Reverse	n
-103089310-103089560(-)	229	185	44	Reverse	n
-103089310-103089560(-)	443	132	311	Reverse	y
-103089310-103089560(-)	175	110	65	Reverse	n
-103089310-103089560(-)	106	38	68	Reverse	n
-103089310-103089560(-)	128	3	125	Reverse	n
-103089310-103089560(-)	192	1	191	Reverse	n
+seqID	transcript	orf_start	orf_end	length	strand	sense	longest
+STRG.4.1(-)_1	STRG.4.1	3	77	74	-	normal	n
+STRG.4.1(-)_2	STRG.4.1	59	88	29	-	normal	n
+STRG.4.1(-)_3	STRG.4.1	92	127	35	-	normal	n
+STRG.4.1(-)_4	STRG.4.1	131	268	137	-	normal	n
+STRG.4.1(-)_5	STRG.4.1	81	332	251	-	normal	n
+STRG.4.1(-)_6	STRG.4.1	272	379	107	-	normal	n
+STRG.4.1(-)_7	STRG.4.1	366	437	71	-	normal	n
+STRG.4.1(-)_8	STRG.4.1	465	518	53	-	normal	n
+STRG.4.1(-)_9	STRG.4.1	383	565	182	-	normal	n
+STRG.4.1(-)_10	STRG.4.1	599	664	65	-	normal	n
+STRG.4.1(-)_11	STRG.4.1	522	665	143	-	normal	n
+STRG.4.1(-)_12	STRG.4.1	1	666	665	-	normal	y
+STRG.4.1(-)_13	STRG.4.1	665	594	71	-	reverse_sense	n
+STRG.4.1(-)_14	STRG.4.1	631	491	140	-	reverse_sense	n
+STRG.4.1(-)_15	STRG.4.1	590	375	215	-	reverse_sense	n
+STRG.4.1(-)_16	STRG.4.1	448	341	107	-	reverse_sense	n
+STRG.4.1(-)_17	STRG.4.1	371	312	59	-	reverse_sense	n
+STRG.4.1(-)_18	STRG.4.1	666	271	395	-	reverse_sense	n
+STRG.4.1(-)_19	STRG.4.1	337	260	77	-	reverse_sense	n
+STRG.4.1(-)_20	STRG.4.1	308	255	53	-	reverse_sense	n
+STRG.4.1(-)_21	STRG.4.1	256	224	32	-	reverse_sense	n
+STRG.4.1(-)_22	STRG.4.1	246	169	77	-	reverse_sense	n
+STRG.4.1(-)_23	STRG.4.1	217	128	89	-	reverse_sense	n
+STRG.4.1(-)_24	STRG.4.1	188	78	110	-	reverse_sense	n
+STRG.4.1(-)_25	STRG.4.1	165	58	107	-	reverse_sense	n
+STRG.4.1(-)_26	STRG.4.1	74	18	56	-	reverse_sense	n
+STRG.4.1(-)_27	STRG.4.1	124	2	122	-	reverse_sense	n
+STRG.4.1(-)_28	STRG.4.1	54	1	53	-	reverse_sense	n
+STRG.6.1(-)_1	STRG.6.1	1	63	62	-	normal	n
+STRG.6.1(-)_2	STRG.6.1	24	182	158	-	normal	n
+STRG.6.1(-)_3	STRG.6.1	94	195	101	-	normal	n
+STRG.6.1(-)_4	STRG.6.1	186	233	47	-	normal	n
+STRG.6.1(-)_5	STRG.6.1	2	250	248	-	normal	y
+STRG.6.1(-)_6	STRG.6.1	199	252	53	-	normal	n
+STRG.6.1(-)_7	STRG.6.1	237	121	116	-	reverse_sense	n
+STRG.6.1(-)_8	STRG.6.1	251	93	158	-	reverse_sense	n
+STRG.6.1(-)_9	STRG.6.1	117	85	32	-	reverse_sense	n
+STRG.6.1(-)_10	STRG.6.1	81	34	47	-	reverse_sense	n
+STRG.6.1(-)_11	STRG.6.1	250	14	236	-	reverse_sense	n
+STRG.6.1(-)_12	STRG.6.1	62	3	59	-	reverse_sense	n
+STRG.6.1(-)_13	STRG.6.1	30	1	29	-	reverse_sense	n
+STRG.8.1(-)_1	STRG.8.1	18	56	38	-	normal	n
+STRG.8.1(-)_2	STRG.8.1	60	95	35	-	normal	n
+STRG.8.1(-)_3	STRG.8.1	99	137	38	-	normal	n
+STRG.8.1(-)_4	STRG.8.1	2	205	203	-	normal	y