Mercurial > repos > mbernt > singularity_scriptrunner
comparison tool-data/scripting_images.loc.sample @ 1:0da37b889932 draft
planemo upload for repository https://github.com/bernt-matthias/mb-galaxy-tools/tree/master/tools/scripting/ commit 5c71b60920e887c5fdb2c0ca0118927b1231bde7
| author | mbernt |
|---|---|
| date | Sun, 06 Aug 2023 16:01:44 +0000 |
| parents | |
| children |
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| 0:9512201417a5 | 1:0da37b889932 |
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| 1 # the following six tab separated columns need to be set | |
| 2 # | |
| 3 # id | |
| 4 # a unique id to be used | |
| 5 # name | |
| 6 # name shown to the user | |
| 7 # image_name | |
| 8 # a path or URL to an image to use. Note that when using URLs | |
| 9 # it images will be pulled on the fly to the job working dir | |
| 10 # and the user executing the tools needs to take care of the | |
| 11 # image cache. | |
| 12 # interpreter | |
| 13 # the interpreter that should be applied to the user supplied scripts | |
| 14 # container_type | |
| 15 # apptainer/singularity | |
| 16 # container_params | |
| 17 # parameters to be passed to singularity/apptainer | |
| 18 # --cleanenv --network none --no-mount bind-paths --cpus "\${GALAXY_SLOTS:-1}" | |
| 19 # | |
| 20 # <id>\t<name>\t<image_name>\t<interpreter>\t<container_type>\t<container_params> |