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comparison rapsodyn/extractseq.xml @ 29:7b8646f46010 draft

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author mcharles
date Wed, 08 Oct 2014 09:06:53 -0400
parents ad321ff1b67d
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28:fefe6d89dbf1 29:7b8646f46010
1 <tool id="extractseq" name="extractseq" version="0.03"> 1 <tool id="extractseq" name="extractseq" version="1.01">
2 <description>Extract Sequence around variant position</description> 2 <description>Extract Sequence around variant position</description>
3 <command interpreter="perl"> 3 <command interpreter="perl">
4 extractseq.pl -input_variant_file $input_variant_file -input_assembly_file $input_assembly_file -window_length $window_length > $output_file 4 extractseq.pl -input_variant_file $input_variant_file -input_assembly_file $input_assembly_file -window_length $window_length > $output_file
5 </command> 5 </command>
6 <inputs> 6 <inputs>