annotate rapsodyn/MergeSamFiles.xml @ 10:0a6c1cfe4dc8 draft

Uploaded
author mcharles
date Mon, 19 Jan 2015 04:33:21 -0500
parents 3f7b0788a1c4
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
7
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
1 <tool id="MergeSamFiles" name="MergeSamFiles" version="1.00">
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
2 <description>Merge multiple SAM files</description>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
3 <command interpreter="perl">
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
4 MergeSamFiles.pl $input_files > $output_file
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
5 </command>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
6 <inputs>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
7 <param name="input_files" type="data" format="sam" multiple="true" label="Select suitable SAM files from your history"/>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
8 </inputs>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
9 <outputs>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
10 <data name="output_file" format="sam" label="MERGE on ${on_string}"/>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
11 </outputs>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
12
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
13 <help>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
14
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
15
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
16
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
17 </help>
3f7b0788a1c4 Uploaded
mcharles
parents:
diff changeset
18 </tool>