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7
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1 <tool id="PileupVariant" name="PileupVariant" version="1.01">
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0
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2 <description>Keep only mpileup line with variant</description>
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3 <command interpreter="perl">
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7
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4 PileupVariant.pl -input_pileup_file $input_pileup_file -log_file $log_file > $output_pileup_file
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0
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5 </command>
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6 <inputs>
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7
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7 <param name="input_pileup_file" type="data" format="pileup" label="Select a suitable input file from your history"/>
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0
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8 </inputs>
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9 <outputs>
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7
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10 <data name="output_pileup_file" format="pileup" label="${tool.name} on ${on_string}"/>
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11 <data name="log_file" format="txt" label="${tool.name} LOG on ${on_string}"/>
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0
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12 </outputs>
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13
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14 <help>
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15
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16
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17
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18 </help>
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19 </tool>
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