Mercurial > repos > mcharles > rapsosnp
comparison rapsodyn/filtersam_mapped_and_unique.xml @ 0:442a7c88b886 draft
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author | mcharles |
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date | Wed, 10 Sep 2014 09:18:15 -0400 |
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children | 3f7b0788a1c4 |
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-1:000000000000 | 0:442a7c88b886 |
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1 <tool id="filtersam_mapped_and_unique" name="filtersam_mapped_and_unique" version="0.01"> | |
2 <description>Filter SAM file for uniq and well mapped pair-end reads</description> | |
3 <command interpreter="perl"> | |
4 filtersam_mapped_and_unique.pl $input_sam_file > $output_file | |
5 </command> | |
6 <inputs> | |
7 <param name="input_sam_file" type="data" format="sam" label="Select a suitable input SAM file from your history"/> | |
8 </inputs> | |
9 <outputs> | |
10 <data name="output_file" format="sam" label="${tool.name} on ${on_string}"/> | |
11 </outputs> | |
12 | |
13 <help> | |
14 | |
15 | |
16 | |
17 </help> | |
18 </tool> |