Mercurial > repos > mcharles > rapsosnp

comparison rapsodyn/MergeFile2x.xml @ 1:7f36bd129321 draft

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author mcharles
date Wed, 10 Sep 2014 10:24:01 -0400
parents
children
comparison
equal deleted inserted replaced
0:442a7c88b886 1:7f36bd129321
1 <tool id="MergeFile2x" name="MergeFile2x" version="0.01">
2 <description>Merge splitted file</description>
3 <command interpreter="perl">
4 MergeFile2x.pl $input_file1 $input_file2 > $output_file
5 </command>
6 <inputs>
7 <param name="out_format" type="select" label="Format">
8 <option value="pileup">pileup</option>
9 <option value="fastq">fastq</option>
10 <option value="fastqsanger">fastqsanger</option>
11 <option value="sam">sam</option>
12 <option value="fasta">fasta</option>
13 </param>
14 <param name="input_file1" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 1st file from your history"/>
15 <param name="input_file2" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 2nd file from your history"/>
16 </inputs>
17 <outputs>
18 <data name="output_file" format="txt" label="MERGE">
19 <change_format>
20 <when input="out_format" value="pileup" format="pileup" />
21 <when input="out_format" value="fastq" format="fastq" />
22 <when input="out_format" value="fastqsanger" format="fastqsanger" />
23 <when input="out_format" value="sam" format="sam" />
24 <when input="out_format" value="fasta" format="fasta" />
25 </change_format>
26 </data>
27 </outputs>
28
29 <help>
30
31
32
33 </help>
34 </tool>