Mercurial > repos > mcharles > rapsosnp

diff rapsodyn/MergeSamFiles.xml @ 7:3f7b0788a1c4 draft

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author mcharles
date Tue, 07 Oct 2014 10:34:34 -0400
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/rapsodyn/MergeSamFiles.xml	Tue Oct 07 10:34:34 2014 -0400
@@ -0,0 +1,18 @@
+<tool id="MergeSamFiles" name="MergeSamFiles" version="1.00">
+<description>Merge multiple SAM files</description>
+<command interpreter="perl">
+    MergeSamFiles.pl $input_files > $output_file 
+</command>
+<inputs>
+<param name="input_files"  type="data" format="sam" multiple="true" label="Select suitable SAM files from your history"/>
+</inputs>
+<outputs>
+<data name="output_file" format="sam" label="MERGE on ${on_string}"/>
+</outputs>
+
+<help>
+
+
+
+</help>
+</tool>