view rapsodyn/CreateMatrix.pl @ 10:0a6c1cfe4dc8 draft

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author mcharles
date Mon, 19 Jan 2015 04:33:21 -0500
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children 93e6f2af1ce2
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#!/usr/bin/perl
#V1.0.0
use strict;
use warnings;
use Getopt::Long;

my $input_pileup_file;
my $input_variant_file;
my $input_variant_unique_file;

GetOptions (
"input_pileup_file=s" => \$input_pileup_file,
"input_variant_file=s" => \$input_variant_file,
"input_variant_unique_file=s" => \$input_variant_unique_file
) or die("Error in command line arguments\n");



print "$input_pileup_file\n$input_variant_file\n$input_variant_unique_file\n";