Mercurial > repos > mcharles > rapsosnp
view rapsodyn/MergeFile4x.xml @ 2:761fecc07fa9 draft
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author | mcharles |
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date | Thu, 11 Sep 2014 03:10:47 -0400 |
parents | 7f36bd129321 |
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<tool id="MergeFile4x" name="MergeFile4x" version="0.01"> <description>Merge splitted file</description> <command interpreter="perl"> MergeFile4x.pl $input_file1 $input_file2 $input_file3 $input_file4 > $output_file </command> <inputs> <param name="out_format" type="select" label="Format"> <option value="pileup">pileup</option> <option value="fastq">fastq</option> <option value="fastqsanger">fastqsanger</option> <option value="sam">sam</option> <option value="fasta">fasta</option> </param> <param name="input_file1" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 1st file from your history"/> <param name="input_file2" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 2nd file from your history"/> <param name="input_file3" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 3rd file from your history"/> <param name="input_file4" type="data" format="txt,fastq,fastqsanger,fastqillumina,pileup,sam,fasta" label="Select a suitable 4th file from your history"/> </inputs> <outputs> <data name="output_file" format="txt" label="MERGE on ${on_string}"> <change_format> <when input="out_format" value="pileup" format="pileup" /> <when input="out_format" value="fastq" format="fastq" /> <when input="out_format" value="fastqsanger" format="fastqsanger" /> <when input="out_format" value="sam" format="sam" /> <when input="out_format" value="fasta" format="fasta" /> </change_format> </data> </outputs> <help> </help> </tool>