Mercurial > repos > mcharles > rapsosnp
view rapsodyn/filtersam_mapped_and_unique.xml @ 14:93e6f2af1ce2 draft
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author | mcharles |
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date | Mon, 26 Jan 2015 18:10:52 -0500 |
parents | 0a6c1cfe4dc8 |
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<tool id="filtersam_mapped_and_unique" name="filtersam_mapped_and_unique" version="1.10"> <description>Filter SAM file for uniq and well mapped pair-end reads</description> <command interpreter="perl"> filtersam_mapped_and_unique.pl -input_sam_file $input_sam_file -log_file $log_file> $output_sam_file </command> <inputs> <param name="input_sam_file" type="data" format="sam" label="Select a suitable input SAM file from your history"/> </inputs> <outputs> <data name="output_sam_file" format="sam" label="${tool.name} on ${on_string}"/> <data name="log_file" format="txt" label="${tool.name} LOG on ${on_string}"/> </outputs> <help> </help> </tool>