Mercurial > repos > md-anderson-bioinformatics > matrix_manipulation
comparison Matrix_Validations.xml @ 1:f1bcd79cd923 draft default tip
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author | insilico-bob |
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date | Tue, 27 Nov 2018 14:20:40 -0500 |
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0:7f12c81e2083 | 1:f1bcd79cd923 |
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1 <?xml version='1.1' encoding='utf-8'?> | |
2 <tool id="Matrix_Validations" name="Matrix Data Validation" version="2.2"> | |
3 <description> Locate and identify non-numbers</description> | |
4 <command interpreter="python">Matrix_Validations.py '$p_input' 'Zero' 'Row' '$output_file'</command> | |
5 <inputs> | |
6 <param name="p_input" type="data" format="tabular" label="Input Matrix" /> | |
7 | |
8 <!-- | |
9 <conditional name="extra"> | |
10 <param name="replacement" type="select" label="Choose Replacement Type for Non-Numeric Data Cells"> | |
11 <option value="Mean">Mean</option> | |
12 <option value="Zero">Zero</option> | |
13 </param> | |
14 <when value="Mean"> | |
15 <param name="axes" type="select" label="Choose Axes To Calculate Cell Replacement Value"> | |
16 <option value="Row">Row</option> | |
17 <option value="Column">Column</option> | |
18 </param> | |
19 </when> | |
20 <when value="Zero"> | |
21 <param name="axes" type="text" size="10" hidden="true" value="Row"/> | |
22 </when> | |
23 </conditional> | |
24 --> | |
25 <!-- replace by when above to place zero values doesn't matter if by row or column | |
26 <param name="axes" type="select" label="Choose Axes To Calculate Cell Replacement Value"> | |
27 <option value="Row">Row</option> | |
28 <option value="Column">Column</option> | |
29 </param> | |
30 --> | |
31 | |
32 | |
33 </inputs> | |
34 | |
35 <outputs> | |
36 <data name="output_file" format="txt" /> | |
37 </outputs> | |
38 | |
39 </tool> | |
40 |