Mercurial > repos > melpetera > idchoice
diff IDchoice/IDchoice_wrap.R @ 1:bb19b1d15732 draft default tip
Uploaded
author | melpetera |
---|---|
date | Thu, 19 Dec 2019 05:29:57 -0500 |
parents | b7a6a88f518a |
children |
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--- a/IDchoice/IDchoice_wrap.R Thu Oct 11 05:47:29 2018 -0400 +++ b/IDchoice/IDchoice_wrap.R Thu Dec 19 05:29:57 2019 -0500 @@ -7,7 +7,8 @@ # User: Galaxy # # Original data: used with IDchoice_script.R # # Starting date: 01-06-2017 # -# V-1: Firt version of wrapper # +# V-1: First version of wrapper # +# V-2: Additional information in stdout # # # # # # Input files: dataMatrix ; Metadata file # @@ -31,8 +32,22 @@ if(length(args) < 7){ stop("NOT enough argument !!!") } +cat('\nJob starting time:\n',format(Sys.time(), "%a %d %b %Y %X"), +'\n\n--------------------------------------------------------------------', +'\nParameters used in "ID choice":\n\n') +print(args) +cat('--------------------------------------------------------------------\n\n') + + id.choice(args$dataMatrix_in, args$Metadata_in, args$metatype, args$col_name, args$makeunique, args$DM_out, args$meta_out) +cat('\n--------------------------------------------------------------------', +'\nInformation about R (version, Operating System, attached or loaded packages):\n\n') +sessionInfo() +cat('--------------------------------------------------------------------\n', +'\nJob ending time:\n',format(Sys.time(), "%a %d %b %Y %X")) + + #delete the parameters to avoid the passage to the next tool in .RData image rm(args)